Experiment: L-Glutamic (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PP_0784 and PP_0785 are separated by 44 nucleotides PP_0785 and PP_0786 are separated by 330 nucleotides
PP_0784: PP_0784 - conserved protein of unknown function, at 899,891 to 900,508
_0784
PP_0785: PP_0785 - putative cysZ protein, required for sulfate transport, at 900,553 to 901,281
_0785
PP_0786: PP_0786 - thioredoxin reductase, at 901,612 to 902,574
_0786
Position (kb) 900
901
902 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 899.600 kb on + strand at 899.601 kb on - strand at 899.778 kb on - strand at 899.781 kb on + strand at 899.781 kb on + strand at 899.871 kb on - strand at 899.916 kb on + strand at 900.008 kb on + strand, within PP_0784 at 900.036 kb on - strand, within PP_0784 at 900.128 kb on - strand, within PP_0784 at 900.131 kb on + strand, within PP_0784 at 900.215 kb on - strand, within PP_0784 at 900.323 kb on - strand, within PP_0784 at 900.357 kb on + strand, within PP_0784 at 900.358 kb on - strand, within PP_0784 at 900.453 kb on + strand at 900.453 kb on + strand at 900.453 kb on + strand at 900.453 kb on + strand at 900.454 kb on - strand at 900.454 kb on - strand at 900.454 kb on - strand at 900.454 kb on - strand at 900.456 kb on + strand at 900.488 kb on + strand at 900.489 kb on - strand at 900.507 kb on - strand at 900.582 kb on + strand at 900.583 kb on - strand at 900.583 kb on - strand at 900.644 kb on + strand, within PP_0785 at 900.746 kb on + strand, within PP_0785 at 900.747 kb on - strand, within PP_0785 at 900.896 kb on - strand, within PP_0785 at 900.952 kb on + strand, within PP_0785 at 900.952 kb on + strand, within PP_0785 at 900.952 kb on + strand, within PP_0785 at 900.952 kb on + strand, within PP_0785 at 900.953 kb on - strand, within PP_0785 at 900.953 kb on - strand, within PP_0785 at 901.002 kb on + strand, within PP_0785 at 901.002 kb on + strand, within PP_0785 at 901.002 kb on + strand, within PP_0785 at 901.073 kb on + strand, within PP_0785 at 901.073 kb on + strand, within PP_0785 at 901.074 kb on - strand, within PP_0785 at 901.074 kb on - strand, within PP_0785 at 901.074 kb on - strand, within PP_0785 at 901.086 kb on + strand, within PP_0785 at 901.087 kb on - strand, within PP_0785 at 901.087 kb on - strand, within PP_0785 at 901.151 kb on + strand, within PP_0785 at 901.151 kb on + strand, within PP_0785 at 901.250 kb on + strand at 901.251 kb on - strand at 901.251 kb on - strand at 901.283 kb on + strand at 901.283 kb on + strand at 901.283 kb on + strand at 901.284 kb on - strand at 901.284 kb on - strand at 901.318 kb on + strand at 901.370 kb on + strand at 901.370 kb on + strand at 901.371 kb on - strand at 901.371 kb on - strand at 901.371 kb on - strand at 901.395 kb on - strand at 901.395 kb on - strand at 901.413 kb on + strand at 901.424 kb on + strand at 901.425 kb on - strand at 901.425 kb on - strand at 901.425 kb on - strand at 901.425 kb on - strand at 901.425 kb on - strand at 901.425 kb on - strand at 901.454 kb on + strand at 901.454 kb on + strand at 901.513 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Glutamic (C) remove 899,600 + +0.2 899,601 - +0.1 899,778 - +1.6 899,781 + +0.5 899,781 + +0.9 899,871 - +1.2 899,916 + +1.6 900,008 + PP_0784 0.19 -0.5 900,036 - PP_0784 0.23 -1.2 900,128 - PP_0784 0.38 +0.2 900,131 + PP_0784 0.39 +1.3 900,215 - PP_0784 0.52 +0.2 900,323 - PP_0784 0.70 +0.3 900,357 + PP_0784 0.75 -2.3 900,358 - PP_0784 0.76 -1.9 900,453 + +0.6 900,453 + -0.1 900,453 + +0.2 900,453 + -0.8 900,454 - +2.6 900,454 - +0.4 900,454 - +0.6 900,454 - +0.4 900,456 + -0.1 900,488 + +0.4 900,489 - +0.4 900,507 - -1.1 900,582 + +0.3 900,583 - +0.3 900,583 - -0.2 900,644 + PP_0785 0.12 +2.2 900,746 + PP_0785 0.26 +2.2 900,747 - PP_0785 0.27 +1.7 900,896 - PP_0785 0.47 +1.6 900,952 + PP_0785 0.55 +1.4 900,952 + PP_0785 0.55 +1.6 900,952 + PP_0785 0.55 +1.3 900,952 + PP_0785 0.55 +2.4 900,953 - PP_0785 0.55 +1.4 900,953 - PP_0785 0.55 +1.4 901,002 + PP_0785 0.62 +1.4 901,002 + PP_0785 0.62 +1.8 901,002 + PP_0785 0.62 -0.4 901,073 + PP_0785 0.71 +2.1 901,073 + PP_0785 0.71 -0.8 901,074 - PP_0785 0.71 +1.1 901,074 - PP_0785 0.71 +3.6 901,074 - PP_0785 0.71 +1.1 901,086 + PP_0785 0.73 +0.8 901,087 - PP_0785 0.73 +3.0 901,087 - PP_0785 0.73 +3.6 901,151 + PP_0785 0.82 +2.5 901,151 + PP_0785 0.82 +1.9 901,250 + +1.2 901,251 - +1.9 901,251 - +0.6 901,283 + +0.6 901,283 + +0.9 901,283 + +1.0 901,284 - +1.9 901,284 - +1.6 901,318 + +0.9 901,370 + -0.4 901,370 + -0.4 901,371 - +1.1 901,371 - +0.6 901,371 - +0.4 901,395 - +0.8 901,395 - -0.4 901,413 + -0.8 901,424 + -1.2 901,425 - +1.6 901,425 - +0.2 901,425 - -0.6 901,425 - -0.4 901,425 - +0.1 901,425 - +0.8 901,454 + -0.3 901,454 + -0.5 901,513 + +1.4
Or see this region's nucleotide sequence