Experiment: D-Glucose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PP_5236 and PP_5237 are separated by 127 nucleotides PP_5237 and PP_5238 are separated by 571 nucleotides
PP_5236: PP_5236 - conserved protein of unknown function, at 5,969,170 to 5,971,293
_5236
PP_5237: PP_5237 - conserved protein of unknown function, at 5,971,421 to 5,971,642
_5237
PP_5238: PP_5238 - conserved protein of unknown function, at 5,972,214 to 5,972,702
_5238
Position (kb) 5971
5972 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3 at 5970.450 kb on + strand, within PP_5236 at 5970.539 kb on + strand, within PP_5236 at 5970.605 kb on + strand, within PP_5236 at 5970.606 kb on - strand, within PP_5236 at 5970.608 kb on + strand, within PP_5236 at 5970.608 kb on + strand, within PP_5236 at 5970.609 kb on - strand, within PP_5236 at 5970.609 kb on - strand, within PP_5236 at 5970.650 kb on + strand, within PP_5236 at 5970.651 kb on - strand, within PP_5236 at 5970.733 kb on + strand, within PP_5236 at 5970.733 kb on + strand, within PP_5236 at 5970.734 kb on - strand, within PP_5236 at 5970.734 kb on - strand, within PP_5236 at 5970.984 kb on + strand, within PP_5236 at 5970.985 kb on - strand, within PP_5236 at 5970.991 kb on + strand, within PP_5236 at 5970.992 kb on - strand, within PP_5236 at 5970.992 kb on - strand, within PP_5236 at 5971.113 kb on - strand at 5971.254 kb on - strand at 5971.254 kb on - strand at 5971.319 kb on + strand at 5971.319 kb on + strand at 5971.319 kb on + strand at 5971.319 kb on + strand at 5971.319 kb on + strand at 5971.320 kb on - strand at 5971.320 kb on - strand at 5971.320 kb on - strand at 5971.326 kb on + strand at 5971.326 kb on + strand at 5971.640 kb on + strand at 5971.659 kb on + strand at 5971.663 kb on + strand at 5971.664 kb on - strand at 5971.670 kb on - strand at 5971.673 kb on + strand at 5971.704 kb on + strand at 5971.762 kb on + strand at 5971.826 kb on + strand at 5971.827 kb on - strand at 5971.868 kb on - strand at 5971.918 kb on - strand at 5972.051 kb on + strand at 5972.088 kb on - strand at 5972.196 kb on + strand at 5972.197 kb on - strand at 5972.229 kb on + strand at 5972.303 kb on + strand, within PP_5238 at 5972.304 kb on - strand, within PP_5238 at 5972.401 kb on - strand, within PP_5238 at 5972.456 kb on - strand, within PP_5238 at 5972.477 kb on - strand, within PP_5238 at 5972.505 kb on + strand, within PP_5238 at 5972.508 kb on + strand, within PP_5238 at 5972.508 kb on + strand, within PP_5238 at 5972.509 kb on - strand, within PP_5238 at 5972.509 kb on - strand, within PP_5238 at 5972.584 kb on + strand, within PP_5238 at 5972.610 kb on - strand, within PP_5238 at 5972.616 kb on + strand, within PP_5238 at 5972.617 kb on - strand, within PP_5238
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucose (C) remove 5,970,450 + PP_5236 0.60 +0.3 5,970,539 + PP_5236 0.64 -0.6 5,970,605 + PP_5236 0.68 -0.1 5,970,606 - PP_5236 0.68 +0.1 5,970,608 + PP_5236 0.68 -0.1 5,970,608 + PP_5236 0.68 -0.1 5,970,609 - PP_5236 0.68 -3.4 5,970,609 - PP_5236 0.68 +3.4 5,970,650 + PP_5236 0.70 +0.2 5,970,651 - PP_5236 0.70 +0.6 5,970,733 + PP_5236 0.74 +1.3 5,970,733 + PP_5236 0.74 +0.7 5,970,734 - PP_5236 0.74 -0.8 5,970,734 - PP_5236 0.74 -0.0 5,970,984 + PP_5236 0.85 +2.2 5,970,985 - PP_5236 0.85 +0.9 5,970,991 + PP_5236 0.86 -1.6 5,970,992 - PP_5236 0.86 -0.1 5,970,992 - PP_5236 0.86 -0.8 5,971,113 - -1.1 5,971,254 - -0.0 5,971,254 - -0.3 5,971,319 + -0.6 5,971,319 + -0.9 5,971,319 + +1.1 5,971,319 + +0.8 5,971,319 + +0.4 5,971,320 - -0.1 5,971,320 - +0.0 5,971,320 - +0.7 5,971,326 + +1.1 5,971,326 + -0.0 5,971,640 + +0.1 5,971,659 + +0.0 5,971,663 + +0.4 5,971,664 - +0.3 5,971,670 - +0.3 5,971,673 + -0.1 5,971,704 + -0.0 5,971,762 + -0.2 5,971,826 + -0.4 5,971,827 - +0.3 5,971,868 - -0.0 5,971,918 - +0.1 5,972,051 + +0.1 5,972,088 - -0.3 5,972,196 + +0.6 5,972,197 - -0.4 5,972,229 + +0.3 5,972,303 + PP_5238 0.18 +0.3 5,972,304 - PP_5238 0.18 +0.8 5,972,401 - PP_5238 0.38 +1.8 5,972,456 - PP_5238 0.49 +0.2 5,972,477 - PP_5238 0.54 +0.3 5,972,505 + PP_5238 0.60 -0.4 5,972,508 + PP_5238 0.60 -0.2 5,972,508 + PP_5238 0.60 -0.9 5,972,509 - PP_5238 0.60 +0.2 5,972,509 - PP_5238 0.60 -0.2 5,972,584 + PP_5238 0.76 +0.0 5,972,610 - PP_5238 0.81 -0.3 5,972,616 + PP_5238 0.82 +0.4 5,972,617 - PP_5238 0.82 -0.2
Or see this region's nucleotide sequence