Experiment: D-Glucose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PP_5072 and PP_5073 are separated by 67 nucleotides PP_5073 and PP_5074 are separated by 56 nucleotides PP_5074 and PP_5075 are separated by 194 nucleotides
PP_5072: PP_5072 - efflux transporter, at 5,788,844 to 5,790,121
_5072
PP_5073: PP_5073 - conserved exported protein of unknown function, at 5,790,189 to 5,790,596
_5073
PP_5074: PP_5074 - Uroporphyrinogen decarboxylase, at 5,790,653 to 5,791,717
_5074
PP_5075: PP_5075 - glutamate synthase (NADPH) beta subunit, at 5,791,912 to 5,793,330
_5075
Position (kb) 5790
5791
5792 Strain fitness (log2 ratio) -1
0
1
2 at 5789.711 kb on + strand, within PP_5072 at 5789.711 kb on + strand, within PP_5072 at 5789.712 kb on - strand, within PP_5072 at 5789.722 kb on + strand, within PP_5072 at 5789.723 kb on - strand, within PP_5072 at 5789.726 kb on + strand, within PP_5072 at 5789.726 kb on + strand, within PP_5072 at 5789.726 kb on + strand, within PP_5072 at 5789.727 kb on - strand, within PP_5072 at 5789.727 kb on - strand, within PP_5072 at 5789.727 kb on - strand, within PP_5072 at 5789.791 kb on + strand, within PP_5072 at 5789.792 kb on - strand, within PP_5072 at 5789.792 kb on - strand, within PP_5072 at 5789.792 kb on - strand, within PP_5072 at 5789.799 kb on + strand, within PP_5072 at 5789.799 kb on + strand, within PP_5072 at 5789.957 kb on + strand, within PP_5072 at 5789.957 kb on + strand, within PP_5072 at 5789.973 kb on - strand, within PP_5072 at 5789.973 kb on - strand, within PP_5072 at 5790.209 kb on + strand at 5790.210 kb on - strand at 5790.210 kb on - strand at 5790.210 kb on - strand at 5790.352 kb on + strand, within PP_5073 at 5790.523 kb on + strand, within PP_5073 at 5790.634 kb on + strand at 5791.828 kb on - strand at 5791.950 kb on + strand at 5791.951 kb on - strand at 5792.294 kb on + strand, within PP_5075 at 5792.295 kb on - strand, within PP_5075 at 5792.295 kb on - strand, within PP_5075 at 5792.329 kb on - strand, within PP_5075 at 5792.372 kb on + strand, within PP_5075 at 5792.373 kb on - strand, within PP_5075 at 5792.412 kb on + strand, within PP_5075 at 5792.412 kb on + strand, within PP_5075 at 5792.591 kb on + strand, within PP_5075 at 5792.591 kb on + strand, within PP_5075 at 5792.591 kb on + strand, within PP_5075 at 5792.591 kb on + strand, within PP_5075 at 5792.591 kb on + strand, within PP_5075 at 5792.592 kb on - strand, within PP_5075 at 5792.592 kb on - strand, within PP_5075 at 5792.592 kb on - strand, within PP_5075 at 5792.592 kb on - strand, within PP_5075 at 5792.592 kb on - strand, within PP_5075 at 5792.592 kb on - strand, within PP_5075 at 5792.592 kb on - strand, within PP_5075 at 5792.597 kb on + strand, within PP_5075 at 5792.597 kb on + strand, within PP_5075 at 5792.597 kb on + strand, within PP_5075 at 5792.597 kb on + strand, within PP_5075 at 5792.597 kb on + strand, within PP_5075 at 5792.598 kb on - strand, within PP_5075 at 5792.598 kb on - strand, within PP_5075 at 5792.598 kb on - strand, within PP_5075 at 5792.598 kb on - strand, within PP_5075 at 5792.598 kb on - strand, within PP_5075 at 5792.598 kb on - strand, within PP_5075 at 5792.598 kb on - strand, within PP_5075 at 5792.598 kb on - strand, within PP_5075 at 5792.598 kb on - strand, within PP_5075 at 5792.602 kb on - strand, within PP_5075 at 5792.602 kb on - strand, within PP_5075 at 5792.602 kb on - strand, within PP_5075 at 5792.627 kb on + strand, within PP_5075
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucose (C) remove 5,789,711 + PP_5072 0.68 +0.5 5,789,711 + PP_5072 0.68 +0.1 5,789,712 - PP_5072 0.68 -0.3 5,789,722 + PP_5072 0.69 -0.1 5,789,723 - PP_5072 0.69 -0.5 5,789,726 + PP_5072 0.69 -0.2 5,789,726 + PP_5072 0.69 +0.5 5,789,726 + PP_5072 0.69 +0.6 5,789,727 - PP_5072 0.69 -0.9 5,789,727 - PP_5072 0.69 +0.1 5,789,727 - PP_5072 0.69 -0.2 5,789,791 + PP_5072 0.74 -0.0 5,789,792 - PP_5072 0.74 -0.5 5,789,792 - PP_5072 0.74 +0.3 5,789,792 - PP_5072 0.74 +0.7 5,789,799 + PP_5072 0.75 +0.1 5,789,799 + PP_5072 0.75 -0.4 5,789,957 + PP_5072 0.87 +0.6 5,789,957 + PP_5072 0.87 +0.3 5,789,973 - PP_5072 0.88 -0.3 5,789,973 - PP_5072 0.88 +0.5 5,790,209 + -0.4 5,790,210 - -0.0 5,790,210 - -0.1 5,790,210 - +0.3 5,790,352 + PP_5073 0.40 +0.0 5,790,523 + PP_5073 0.82 -1.1 5,790,634 + -0.3 5,791,828 - +0.2 5,791,950 + -0.1 5,791,951 - -0.6 5,792,294 + PP_5075 0.27 -0.9 5,792,295 - PP_5075 0.27 -0.1 5,792,295 - PP_5075 0.27 -0.4 5,792,329 - PP_5075 0.29 -1.1 5,792,372 + PP_5075 0.32 +1.4 5,792,373 - PP_5075 0.32 -0.5 5,792,412 + PP_5075 0.35 +1.9 5,792,412 + PP_5075 0.35 -0.8 5,792,591 + PP_5075 0.48 -0.4 5,792,591 + PP_5075 0.48 -0.2 5,792,591 + PP_5075 0.48 +1.1 5,792,591 + PP_5075 0.48 -0.7 5,792,591 + PP_5075 0.48 -0.0 5,792,592 - PP_5075 0.48 -0.7 5,792,592 - PP_5075 0.48 -0.4 5,792,592 - PP_5075 0.48 -1.7 5,792,592 - PP_5075 0.48 -0.7 5,792,592 - PP_5075 0.48 -0.8 5,792,592 - PP_5075 0.48 -0.2 5,792,592 - PP_5075 0.48 -0.2 5,792,597 + PP_5075 0.48 -0.0 5,792,597 + PP_5075 0.48 -0.3 5,792,597 + PP_5075 0.48 -0.2 5,792,597 + PP_5075 0.48 -0.2 5,792,597 + PP_5075 0.48 -1.0 5,792,598 - PP_5075 0.48 +0.0 5,792,598 - PP_5075 0.48 -1.2 5,792,598 - PP_5075 0.48 -0.3 5,792,598 - PP_5075 0.48 -0.3 5,792,598 - PP_5075 0.48 +0.2 5,792,598 - PP_5075 0.48 +0.1 5,792,598 - PP_5075 0.48 +0.8 5,792,598 - PP_5075 0.48 -0.2 5,792,598 - PP_5075 0.48 +0.1 5,792,602 - PP_5075 0.49 +1.1 5,792,602 - PP_5075 0.49 -0.5 5,792,602 - PP_5075 0.49 +0.1 5,792,627 + PP_5075 0.50 -1.0
Or see this region's nucleotide sequence