Experiment: D-Glucose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PP_4800 and PP_4801 are separated by 2 nucleotides PP_4801 and PP_4802 overlap by 4 nucleotides PP_4802 and PP_4803 are separated by 73 nucleotides
PP_4800: PP_4800 - Lipoyl synthase, at 5,463,448 to 5,464,464
_4800
PP_4801: PP_4801 - Octanoyltransferase, at 5,464,467 to 5,465,117
_4801
PP_4802: PP_4802 - putative lipoate regulatory protein, at 5,465,114 to 5,465,389
_4802
PP_4803: PP_4803 - D-alanyl-D-alanine carboxypeptidase, at 5,465,463 to 5,466,623
_4803
Position (kb) 5465
5466 Strain fitness (log2 ratio) -1
0
1 at 5464.505 kb on - strand at 5465.407 kb on - strand at 5465.462 kb on - strand at 5465.462 kb on - strand at 5465.488 kb on - strand at 5465.682 kb on - strand, within PP_4803 at 5465.688 kb on - strand, within PP_4803 at 5465.688 kb on - strand, within PP_4803 at 5465.688 kb on - strand, within PP_4803 at 5465.688 kb on - strand, within PP_4803 at 5465.780 kb on - strand, within PP_4803 at 5466.034 kb on + strand at 5466.034 kb on + strand, within PP_4803 at 5466.035 kb on - strand, within PP_4803 at 5466.043 kb on + strand, within PP_4803 at 5466.043 kb on + strand, within PP_4803 at 5466.043 kb on + strand, within PP_4803 at 5466.107 kb on - strand, within PP_4803 at 5466.291 kb on + strand, within PP_4803
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucose (C) remove 5,464,505 - +0.9 5,465,407 - -0.9 5,465,462 - +0.0 5,465,462 - +0.2 5,465,488 - +0.7 5,465,682 - PP_4803 0.19 -0.1 5,465,688 - PP_4803 0.19 -0.3 5,465,688 - PP_4803 0.19 -0.2 5,465,688 - PP_4803 0.19 -0.8 5,465,688 - PP_4803 0.19 +0.4 5,465,780 - PP_4803 0.27 -0.7 5,466,034 + +0.2 5,466,034 + PP_4803 0.49 -0.1 5,466,035 - PP_4803 0.49 -0.7 5,466,043 + PP_4803 0.50 +0.3 5,466,043 + PP_4803 0.50 -0.3 5,466,043 + PP_4803 0.50 +0.9 5,466,107 - PP_4803 0.55 +0.0 5,466,291 + PP_4803 0.71 -0.5
Or see this region's nucleotide sequence