Strain Fitness in Pseudomonas putida KT2440 around PP_2155

Experiment: D-Glucose (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntPP_2154 and PP_2155 overlap by 8 nucleotidesPP_2155 and PP_2156 are separated by 60 nucleotides PP_2154: PP_2154 - LolC, at 2,461,002 to 2,462,252 _2154 PP_2155: PP_2155 - Lipoprotein-releasing system ATP-binding protein LolD, at 2,462,245 to 2,462,943 _2155 PP_2156: PP_2156 - Lipoprotein releasing system, permease protein, at 2,463,004 to 2,464,245 _2156 Position (kb) 2462 2463Strain fitness (log2 ratio) -1 0 1at 2462.244 kb on + strandat 2462.244 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction D-Glucose (C)
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2,462,244 + +0.0
2,462,244 + +0.5

Or see this region's nucleotide sequence