Experiment: D-Glucose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PP_0931 and PP_0932 are separated by 15 nucleotides PP_0932 and PP_0933 are separated by 103 nucleotides PP_0933 and PP_0934 are separated by 220 nucleotides
PP_0931: PP_0931 - Glutamyl-tRNA(Gln) amidotransferase subunit A, at 1,073,404 to 1,074,855
_0931
PP_0932: PP_0932 - Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C, at 1,074,871 to 1,075,179
_0932
PP_0933: PP_0933 - cell wall structural actin-like protein MreB, at 1,075,283 to 1,076,401
_0933
PP_0934: PP_0934 - Cell shape-determining protein MreC, at 1,076,622 to 1,077,620
_0934
Position (kb)
1075
1076
1077 Strain fitness (log2 ratio)
-1
0
1
2
3 at 1076.437 kb on + strand at 1076.437 kb on + strand at 1076.437 kb on + strand at 1076.437 kb on + strand at 1076.437 kb on + strand at 1076.437 kb on + strand at 1076.440 kb on + strand at 1076.440 kb on + strand at 1076.440 kb on + strand at 1076.440 kb on + strand at 1076.440 kb on + strand at 1076.444 kb on + strand at 1076.444 kb on + strand at 1076.444 kb on + strand at 1076.444 kb on + strand at 1076.452 kb on + strand at 1076.452 kb on + strand at 1076.458 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucose (C) remove 1,076,437 + -0.8 1,076,437 + +0.2 1,076,437 + -0.3 1,076,437 + +0.0 1,076,437 + +0.0 1,076,437 + -0.5 1,076,440 + +0.7 1,076,440 + -0.5 1,076,440 + +0.7 1,076,440 + -0.7 1,076,440 + -0.4 1,076,444 + +3.3 1,076,444 + +0.6 1,076,444 + +0.7 1,076,444 + -1.5 1,076,452 + -0.3 1,076,452 + +1.0 1,076,458 + +1.0
Or see this region's nucleotide sequence