Experiment: D-Glucose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PP_0785 and PP_0786 are separated by 330 nucleotides PP_0786 and PP_0787 are separated by 75 nucleotides
PP_0785: PP_0785 - putative cysZ protein, required for sulfate transport, at 900,553 to 901,281
_0785
PP_0786: PP_0786 - thioredoxin reductase, at 901,612 to 902,574
_0786
PP_0787: PP_0787 - quinolinate phosphoribosyltransferase (decarboxylating) monomer, at 902,650 to 903,498
_0787
Position (kb) 901
902
903 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1 at 900.644 kb on + strand, within PP_0785 at 900.746 kb on + strand, within PP_0785 at 900.747 kb on - strand, within PP_0785 at 900.896 kb on - strand, within PP_0785 at 900.952 kb on + strand, within PP_0785 at 900.952 kb on + strand, within PP_0785 at 900.952 kb on + strand, within PP_0785 at 900.952 kb on + strand, within PP_0785 at 900.953 kb on - strand, within PP_0785 at 900.953 kb on - strand, within PP_0785 at 901.002 kb on + strand, within PP_0785 at 901.002 kb on + strand, within PP_0785 at 901.002 kb on + strand, within PP_0785 at 901.073 kb on + strand, within PP_0785 at 901.073 kb on + strand, within PP_0785 at 901.074 kb on - strand, within PP_0785 at 901.074 kb on - strand, within PP_0785 at 901.074 kb on - strand, within PP_0785 at 901.086 kb on + strand, within PP_0785 at 901.087 kb on - strand, within PP_0785 at 901.087 kb on - strand, within PP_0785 at 901.151 kb on + strand, within PP_0785 at 901.151 kb on + strand, within PP_0785 at 901.250 kb on + strand at 901.251 kb on - strand at 901.251 kb on - strand at 901.283 kb on + strand at 901.283 kb on + strand at 901.283 kb on + strand at 901.284 kb on - strand at 901.284 kb on - strand at 901.318 kb on + strand at 901.370 kb on + strand at 901.370 kb on + strand at 901.371 kb on - strand at 901.371 kb on - strand at 901.371 kb on - strand at 901.395 kb on - strand at 901.395 kb on - strand at 901.413 kb on + strand at 901.424 kb on + strand at 901.425 kb on - strand at 901.425 kb on - strand at 901.425 kb on - strand at 901.425 kb on - strand at 901.425 kb on - strand at 901.425 kb on - strand at 901.440 kb on + strand at 901.454 kb on + strand at 901.454 kb on + strand at 901.513 kb on + strand at 902.717 kb on + strand at 902.717 kb on + strand at 902.717 kb on + strand at 902.717 kb on + strand at 902.717 kb on + strand at 902.717 kb on + strand at 902.717 kb on + strand at 902.717 kb on + strand at 902.717 kb on + strand at 902.718 kb on - strand at 902.718 kb on - strand at 902.718 kb on - strand at 902.718 kb on - strand at 902.800 kb on - strand, within PP_0787 at 903.008 kb on + strand, within PP_0787 at 903.009 kb on - strand, within PP_0787 at 903.016 kb on + strand, within PP_0787 at 903.016 kb on + strand, within PP_0787 at 903.017 kb on - strand, within PP_0787 at 903.487 kb on + strand at 903.515 kb on + strand at 903.515 kb on + strand at 903.515 kb on + strand at 903.515 kb on + strand at 903.515 kb on + strand at 903.516 kb on - strand at 903.516 kb on - strand at 903.516 kb on - strand at 903.516 kb on - strand at 903.530 kb on - strand at 903.531 kb on + strand at 903.531 kb on + strand at 903.532 kb on - strand at 903.551 kb on + strand at 903.551 kb on + strand at 903.551 kb on + strand at 903.552 kb on - strand at 903.552 kb on - strand at 903.552 kb on - strand at 903.552 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucose (C) remove 900,644 + PP_0785 0.12 +0.6 900,746 + PP_0785 0.26 +0.8 900,747 - PP_0785 0.27 -0.1 900,896 - PP_0785 0.47 -0.8 900,952 + PP_0785 0.55 -1.1 900,952 + PP_0785 0.55 +1.1 900,952 + PP_0785 0.55 -0.3 900,952 + PP_0785 0.55 +0.3 900,953 - PP_0785 0.55 +0.6 900,953 - PP_0785 0.55 -1.6 901,002 + PP_0785 0.62 +0.2 901,002 + PP_0785 0.62 +0.5 901,002 + PP_0785 0.62 +1.0 901,073 + PP_0785 0.71 -1.1 901,073 + PP_0785 0.71 +1.2 901,074 - PP_0785 0.71 -0.8 901,074 - PP_0785 0.71 +0.1 901,074 - PP_0785 0.71 +0.9 901,086 + PP_0785 0.73 +0.7 901,087 - PP_0785 0.73 +1.1 901,087 - PP_0785 0.73 +1.7 901,151 + PP_0785 0.82 +0.8 901,151 + PP_0785 0.82 -0.1 901,250 + +0.0 901,251 - -1.2 901,251 - +0.8 901,283 + -0.8 901,283 + -0.6 901,283 + -1.4 901,284 - +1.3 901,284 - +0.0 901,318 + -0.6 901,370 + +0.0 901,370 + +0.3 901,371 - -2.2 901,371 - +0.4 901,371 - -0.9 901,395 - -0.7 901,395 - -0.3 901,413 + -0.7 901,424 + -0.5 901,425 - -0.3 901,425 - -0.3 901,425 - -1.0 901,425 - -2.3 901,425 - +0.7 901,425 - -0.8 901,440 + -0.6 901,454 + -0.6 901,454 + -0.2 901,513 + +0.7 902,717 + -2.0 902,717 + -1.8 902,717 + -2.0 902,717 + -4.2 902,717 + -3.2 902,717 + -4.4 902,717 + -2.3 902,717 + -2.6 902,717 + -2.5 902,718 - -2.6 902,718 - -1.0 902,718 - +0.1 902,718 - -4.0 902,800 - PP_0787 0.18 -2.2 903,008 + PP_0787 0.42 -3.5 903,009 - PP_0787 0.42 -1.9 903,016 + PP_0787 0.43 -3.2 903,016 + PP_0787 0.43 -2.7 903,017 - PP_0787 0.43 -2.6 903,487 + -1.8 903,515 + -1.3 903,515 + +0.7 903,515 + -0.6 903,515 + -0.6 903,515 + +0.4 903,516 - +0.4 903,516 - -0.2 903,516 - -0.5 903,516 - +1.1 903,530 - -0.3 903,531 + +0.6 903,531 + -0.3 903,532 - -0.7 903,551 + -0.2 903,551 + -0.3 903,551 + +0.1 903,552 - -0.0 903,552 - +0.9 903,552 - +1.2 903,552 - +0.3
Or see this region's nucleotide sequence