Experiment: D-Glucose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PP_0636 and PP_0637 are separated by 630 nucleotides PP_0637 and PP_0638 are separated by 18 nucleotides
PP_0636: PP_0636 - Cold shock DNA-binding domain protein, at 743,595 to 744,335
_0636
PP_0637: PP_0637 - transposase, at 744,966 to 746,498
_0637
PP_0638: PP_0638 - transposase, at 746,517 to 746,873
_0638
Position (kb) 744
745
746
747 Strain fitness (log2 ratio) -2
-1
0
1 at 743.967 kb on + strand, within PP_0636 at 743.967 kb on + strand, within PP_0636 at 743.968 kb on - strand, within PP_0636 at 743.968 kb on - strand, within PP_0636 at 743.968 kb on - strand, within PP_0636 at 743.970 kb on + strand, within PP_0636 at 743.987 kb on + strand, within PP_0636 at 743.988 kb on - strand, within PP_0636 at 743.988 kb on - strand, within PP_0636 at 744.066 kb on + strand, within PP_0636 at 744.088 kb on + strand, within PP_0636 at 744.094 kb on + strand, within PP_0636 at 744.207 kb on + strand, within PP_0636 at 744.208 kb on - strand, within PP_0636 at 744.308 kb on + strand at 744.309 kb on - strand at 744.309 kb on - strand at 744.369 kb on + strand at 744.369 kb on + strand at 744.380 kb on - strand at 744.380 kb on - strand at 744.399 kb on + strand at 744.400 kb on - strand at 744.455 kb on - strand at 744.475 kb on - strand at 744.532 kb on - strand at 744.552 kb on + strand at 744.552 kb on + strand at 744.572 kb on + strand at 744.572 kb on + strand at 744.671 kb on - strand at 744.729 kb on + strand at 744.733 kb on - strand at 744.785 kb on - strand at 744.888 kb on + strand at 744.907 kb on - strand at 744.907 kb on - strand at 744.916 kb on + strand at 744.916 kb on + strand at 744.945 kb on - strand at 746.965 kb on + strand at 746.965 kb on + strand at 746.984 kb on + strand at 746.984 kb on + strand at 746.985 kb on - strand at 746.985 kb on - strand at 746.985 kb on - strand at 746.985 kb on - strand at 746.985 kb on - strand at 746.985 kb on - strand at 746.985 kb on - strand at 747.037 kb on + strand at 747.037 kb on + strand at 747.038 kb on - strand at 747.063 kb on + strand at 747.064 kb on - strand at 747.064 kb on - strand at 747.168 kb on + strand at 747.230 kb on - strand at 747.259 kb on + strand at 747.259 kb on + strand at 747.259 kb on + strand at 747.268 kb on - strand at 747.305 kb on - strand at 747.305 kb on - strand at 747.367 kb on + strand at 747.368 kb on - strand at 747.405 kb on + strand at 747.405 kb on + strand at 747.405 kb on + strand at 747.406 kb on - strand at 747.497 kb on + strand at 747.498 kb on - strand at 747.498 kb on - strand at 747.498 kb on - strand at 747.498 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucose (C) remove 743,967 + PP_0636 0.50 -1.0 743,967 + PP_0636 0.50 +0.5 743,968 - PP_0636 0.50 -0.0 743,968 - PP_0636 0.50 +0.4 743,968 - PP_0636 0.50 -0.6 743,970 + PP_0636 0.51 -0.8 743,987 + PP_0636 0.53 -0.1 743,988 - PP_0636 0.53 +0.9 743,988 - PP_0636 0.53 +0.4 744,066 + PP_0636 0.64 -0.3 744,088 + PP_0636 0.67 -0.2 744,094 + PP_0636 0.67 -0.6 744,207 + PP_0636 0.83 +0.2 744,208 - PP_0636 0.83 -0.7 744,308 + +0.5 744,309 - +0.0 744,309 - +0.1 744,369 + +0.2 744,369 + -0.0 744,380 - -0.0 744,380 - -0.1 744,399 + +0.3 744,400 - -0.1 744,455 - -0.3 744,475 - +0.3 744,532 - -1.0 744,552 + +0.0 744,552 + +0.5 744,572 + -0.1 744,572 + -0.1 744,671 - -0.1 744,729 + -0.1 744,733 - -0.1 744,785 - -0.5 744,888 + +0.7 744,907 - +0.0 744,907 - +0.4 744,916 + +0.3 744,916 + -0.1 744,945 - -0.1 746,965 + -0.2 746,965 + +0.1 746,984 + +0.3 746,984 + -0.1 746,985 - -0.8 746,985 - -0.4 746,985 - -0.6 746,985 - +0.3 746,985 - +0.0 746,985 - -0.2 746,985 - +0.1 747,037 + +0.3 747,037 + +0.3 747,038 - +0.0 747,063 + -0.5 747,064 - -0.6 747,064 - -0.1 747,168 + -2.0 747,230 - +0.5 747,259 + +0.2 747,259 + -0.8 747,259 + -0.2 747,268 - -0.3 747,305 - -0.1 747,305 - +0.5 747,367 + -0.5 747,368 - -0.3 747,405 + -0.2 747,405 + -1.2 747,405 + +0.0 747,406 - +0.4 747,497 + +0.3 747,498 - -1.6 747,498 - +0.5 747,498 - +0.8 747,498 - -0.0
Or see this region's nucleotide sequence