Experiment: D-Glucose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PP_0558 and PP_0559 are separated by 17 nucleotides PP_0559 and PP_0560 are separated by 99 nucleotides PP_0560 and PP_0561 are separated by 179 nucleotides
PP_0558: PP_0558 - acetyl-CoA carboxylase - biotin carboxylase subunit, at 648,322 to 649,677
_0558
PP_0559: PP_0559 - acetyl-CoA carboxylase - biotin carboxyl carrier subunit, at 649,695 to 650,156
_0559
PP_0560: PP_0560 - 3-dehydroquinate dehydratase 1, type II, at 650,256 to 650,711
_0560
PP_0561: PP_0561 - thiol/disulfide interchange protein 1, at 650,891 to 652,663
_0561
Position (kb) 650
651 Strain fitness (log2 ratio) -1
0
1 at 650.767 kb on - strand at 650.831 kb on - strand at 650.831 kb on - strand at 650.846 kb on + strand at 650.893 kb on - strand at 650.894 kb on + strand at 650.894 kb on + strand at 650.948 kb on + strand at 651.174 kb on + strand, within PP_0561 at 651.263 kb on - strand, within PP_0561 at 651.354 kb on + strand, within PP_0561 at 651.509 kb on + strand, within PP_0561 at 651.548 kb on + strand, within PP_0561 at 651.549 kb on - strand, within PP_0561 at 651.703 kb on + strand, within PP_0561 at 651.704 kb on - strand, within PP_0561 at 651.704 kb on - strand, within PP_0561 at 651.705 kb on + strand, within PP_0561 at 651.705 kb on + strand, within PP_0561 at 651.705 kb on + strand, within PP_0561 at 651.705 kb on + strand, within PP_0561 at 651.706 kb on - strand, within PP_0561 at 651.706 kb on - strand, within PP_0561 at 651.706 kb on - strand, within PP_0561 at 651.706 kb on - strand, within PP_0561 at 651.706 kb on - strand, within PP_0561 at 651.706 kb on - strand, within PP_0561 at 651.706 kb on - strand, within PP_0561
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucose (C) remove 650,767 - -0.2 650,831 - -1.3 650,831 - +0.6 650,846 + -0.2 650,893 - -0.0 650,894 + +0.6 650,894 + -0.1 650,948 + +0.4 651,174 + PP_0561 0.16 +0.3 651,263 - PP_0561 0.21 -0.4 651,354 + PP_0561 0.26 -0.6 651,509 + PP_0561 0.35 +0.6 651,548 + PP_0561 0.37 -0.2 651,549 - PP_0561 0.37 -0.4 651,703 + PP_0561 0.46 -0.3 651,704 - PP_0561 0.46 +1.0 651,704 - PP_0561 0.46 +0.1 651,705 + PP_0561 0.46 -0.6 651,705 + PP_0561 0.46 -0.2 651,705 + PP_0561 0.46 +0.2 651,705 + PP_0561 0.46 +0.3 651,706 - PP_0561 0.46 -0.3 651,706 - PP_0561 0.46 -0.3 651,706 - PP_0561 0.46 -0.6 651,706 - PP_0561 0.46 -0.1 651,706 - PP_0561 0.46 +0.3 651,706 - PP_0561 0.46 +0.4 651,706 - PP_0561 0.46 -0.1
Or see this region's nucleotide sequence