Experiment: D-Glucose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PP_0517 and PP_0518 overlap by 4 nucleotides PP_0518 and PP_0519 are separated by 18 nucleotides PP_0519 and PP_0520 overlap by 4 nucleotides PP_0520 and PP_0521 are separated by 16 nucleotides
PP_0517: PP_0517 - 6,7-dimethyl-8-ribityllumazine synthase, at 603,696 to 604,172
_0517
PP_0518: PP_0518 - transcription antitermination protein, at 604,169 to 604,669
_0518
PP_0519: PP_0519 - thiamin monophosphate kinase, at 604,688 to 605,656
_0519
PP_0520: PP_0520 - phosphatidylglycerophosphatase A, at 605,653 to 606,156
_0520
PP_0521: PP_0521 - conserved exported protein of unknown function, at 606,173 to 606,916
_0521
Position (kb) 604
605
606 Strain fitness (log2 ratio) -1
0
1 at 605.641 kb on + strand at 605.834 kb on - strand, within PP_0520 at 605.906 kb on + strand, within PP_0520 at 605.906 kb on + strand, within PP_0520 at 606.180 kb on + strand at 606.181 kb on - strand at 606.189 kb on + strand at 606.189 kb on + strand at 606.189 kb on + strand at 606.189 kb on + strand at 606.190 kb on - strand at 606.190 kb on - strand at 606.211 kb on + strand at 606.211 kb on + strand at 606.212 kb on - strand at 606.212 kb on - strand at 606.284 kb on + strand, within PP_0521 at 606.284 kb on + strand, within PP_0521 at 606.284 kb on + strand, within PP_0521 at 606.285 kb on - strand, within PP_0521 at 606.434 kb on + strand, within PP_0521 at 606.435 kb on - strand, within PP_0521 at 606.462 kb on - strand, within PP_0521 at 606.490 kb on + strand, within PP_0521 at 606.490 kb on + strand, within PP_0521 at 606.490 kb on + strand, within PP_0521 at 606.490 kb on + strand, within PP_0521 at 606.490 kb on + strand, within PP_0521 at 606.490 kb on + strand, within PP_0521 at 606.491 kb on - strand, within PP_0521 at 606.491 kb on - strand, within PP_0521 at 606.491 kb on - strand, within PP_0521 at 606.491 kb on - strand, within PP_0521 at 606.491 kb on - strand, within PP_0521 at 606.491 kb on - strand, within PP_0521 at 606.491 kb on - strand, within PP_0521 at 606.491 kb on - strand, within PP_0521 at 606.491 kb on - strand, within PP_0521 at 606.491 kb on - strand, within PP_0521 at 606.491 kb on - strand, within PP_0521 at 606.491 kb on - strand, within PP_0521 at 606.491 kb on - strand, within PP_0521 at 606.491 kb on - strand, within PP_0521 at 606.491 kb on - strand, within PP_0521 at 606.491 kb on - strand, within PP_0521 at 606.491 kb on - strand, within PP_0521 at 606.494 kb on + strand, within PP_0521 at 606.494 kb on + strand, within PP_0521 at 606.494 kb on + strand, within PP_0521 at 606.494 kb on + strand, within PP_0521 at 606.494 kb on + strand, within PP_0521 at 606.494 kb on + strand, within PP_0521 at 606.494 kb on + strand, within PP_0521 at 606.495 kb on - strand, within PP_0521 at 606.495 kb on - strand, within PP_0521 at 606.495 kb on - strand, within PP_0521 at 606.495 kb on - strand, within PP_0521 at 606.495 kb on - strand, within PP_0521 at 606.495 kb on - strand, within PP_0521 at 606.526 kb on + strand, within PP_0521 at 606.548 kb on + strand, within PP_0521 at 606.572 kb on + strand, within PP_0521 at 606.587 kb on + strand, within PP_0521 at 606.587 kb on + strand, within PP_0521 at 606.588 kb on - strand, within PP_0521 at 606.588 kb on - strand, within PP_0521 at 606.588 kb on - strand, within PP_0521 at 606.588 kb on - strand, within PP_0521 at 606.588 kb on - strand, within PP_0521
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucose (C) remove 605,641 + +0.3 605,834 - PP_0520 0.36 -0.4 605,906 + PP_0520 0.50 -0.1 605,906 + PP_0520 0.50 +0.7 606,180 + +0.2 606,181 - -0.4 606,189 + -0.5 606,189 + -1.6 606,189 + -0.3 606,189 + +0.0 606,190 - +0.2 606,190 - +1.0 606,211 + -0.5 606,211 + -0.0 606,212 - +0.8 606,212 - +0.6 606,284 + PP_0521 0.15 +1.6 606,284 + PP_0521 0.15 +0.3 606,284 + PP_0521 0.15 +0.3 606,285 - PP_0521 0.15 +0.6 606,434 + PP_0521 0.35 +0.2 606,435 - PP_0521 0.35 +0.5 606,462 - PP_0521 0.39 +0.5 606,490 + PP_0521 0.43 +0.1 606,490 + PP_0521 0.43 -0.3 606,490 + PP_0521 0.43 +0.1 606,490 + PP_0521 0.43 +0.2 606,490 + PP_0521 0.43 -0.3 606,490 + PP_0521 0.43 -0.8 606,491 - PP_0521 0.43 -0.1 606,491 - PP_0521 0.43 -0.0 606,491 - PP_0521 0.43 +0.0 606,491 - PP_0521 0.43 -0.0 606,491 - PP_0521 0.43 -0.5 606,491 - PP_0521 0.43 -0.2 606,491 - PP_0521 0.43 -0.2 606,491 - PP_0521 0.43 +0.4 606,491 - PP_0521 0.43 -0.5 606,491 - PP_0521 0.43 +0.2 606,491 - PP_0521 0.43 +0.3 606,491 - PP_0521 0.43 -0.3 606,491 - PP_0521 0.43 +0.2 606,491 - PP_0521 0.43 -1.4 606,491 - PP_0521 0.43 +0.1 606,491 - PP_0521 0.43 -0.1 606,491 - PP_0521 0.43 -0.5 606,494 + PP_0521 0.43 -0.2 606,494 + PP_0521 0.43 +0.4 606,494 + PP_0521 0.43 -0.9 606,494 + PP_0521 0.43 +0.6 606,494 + PP_0521 0.43 +0.3 606,494 + PP_0521 0.43 +0.5 606,494 + PP_0521 0.43 +0.4 606,495 - PP_0521 0.43 +0.4 606,495 - PP_0521 0.43 -0.3 606,495 - PP_0521 0.43 -0.5 606,495 - PP_0521 0.43 +0.6 606,495 - PP_0521 0.43 +1.2 606,495 - PP_0521 0.43 -0.2 606,526 + PP_0521 0.47 +0.1 606,548 + PP_0521 0.50 -0.6 606,572 + PP_0521 0.54 +0.0 606,587 + PP_0521 0.56 -0.1 606,587 + PP_0521 0.56 +0.1 606,588 - PP_0521 0.56 -0.1 606,588 - PP_0521 0.56 +0.5 606,588 - PP_0521 0.56 +0.1 606,588 - PP_0521 0.56 -1.6 606,588 - PP_0521 0.56 -0.5
Or see this region's nucleotide sequence