Strain Fitness in Pseudomonas putida KT2440 around PP_0443

Experiment: D-Glucose (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntPP_0441 and PP_0442 are separated by 9 nucleotidesPP_0442 and PP_0443 are separated by 119 nucleotidesPP_0443 and PP_0444 overlap by 1 nucleotidesPP_0444 and PP_0445 are separated by 197 nucleotides PP_0441: PP_0441 - Sec translocation complex - SecE subunit, at 534,104 to 534,472 _0441 PP_0442: PP_0442 - transcription antipausing factor NusG, at 534,482 to 535,015 _0442 PP_0443: PP_0443 - 50S ribosomal protein L11, at 535,135 to 535,566 _0443 PP_0444: PP_0444 - 50S ribosomal protein L1, at 535,566 to 536,261 _0444 PP_0445: PP_0445 - 50S ribosomal protein L10, at 536,459 to 536,959 _0445 Position (kb) 535 536Strain fitness (log2 ratio) -1 0 1at 535.077 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction D-Glucose (C)
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535,077 + -1.2

Or see this region's nucleotide sequence