Experiment: D-Glucose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PP_0435 and PP_0436 are separated by 207 nucleotides PP_0436 and PP_16SC are separated by 815 nucleotides
PP_0435: PP_0435 - Peptidase, M23/M37 family, at 521,299 to 522,726
_0435
PP_0436: PP_0436 - Tyrosine--tRNA ligase, at 522,934 to 524,133
_0436
PP_16SC: PP_16SC - 16S ribosomal RNA, at 524,949 to 526,470
_16SC
Position (kb) 522
523
524
525 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3 at 521.963 kb on + strand, within PP_0435 at 521.964 kb on - strand, within PP_0435 at 522.017 kb on + strand, within PP_0435 at 522.113 kb on + strand, within PP_0435 at 522.113 kb on + strand, within PP_0435 at 522.125 kb on - strand, within PP_0435 at 522.159 kb on - strand, within PP_0435 at 522.367 kb on - strand, within PP_0435 at 522.622 kb on + strand at 522.623 kb on - strand at 522.686 kb on + strand at 522.687 kb on - strand at 522.789 kb on + strand at 522.873 kb on + strand at 524.148 kb on + strand at 524.148 kb on + strand at 524.148 kb on + strand at 524.148 kb on + strand at 524.148 kb on + strand at 524.148 kb on + strand at 524.148 kb on + strand at 524.149 kb on - strand at 524.149 kb on - strand at 524.149 kb on - strand at 524.149 kb on - strand at 524.149 kb on - strand at 524.149 kb on - strand at 524.149 kb on - strand at 524.149 kb on - strand at 524.149 kb on - strand at 524.149 kb on - strand at 524.149 kb on - strand at 524.149 kb on - strand at 524.149 kb on - strand at 524.152 kb on + strand at 524.152 kb on + strand at 524.152 kb on + strand at 524.152 kb on + strand at 524.152 kb on + strand at 524.152 kb on + strand at 524.152 kb on + strand at 524.152 kb on + strand at 524.153 kb on - strand at 524.153 kb on - strand at 524.153 kb on - strand at 524.153 kb on - strand at 524.153 kb on - strand at 524.153 kb on - strand at 524.153 kb on - strand at 524.153 kb on - strand at 524.154 kb on + strand at 524.154 kb on + strand at 524.154 kb on + strand at 524.154 kb on + strand at 524.155 kb on - strand at 524.155 kb on - strand at 524.155 kb on - strand at 524.155 kb on - strand at 524.156 kb on + strand at 524.156 kb on + strand at 524.156 kb on + strand at 524.156 kb on + strand at 524.156 kb on + strand at 524.156 kb on + strand at 524.157 kb on - strand at 524.157 kb on - strand at 524.157 kb on - strand at 524.157 kb on - strand at 524.157 kb on - strand at 524.157 kb on - strand at 524.174 kb on + strand at 524.217 kb on + strand at 524.332 kb on - strand at 524.332 kb on - strand at 524.370 kb on - strand at 524.370 kb on - strand at 524.370 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucose (C) remove 521,963 + PP_0435 0.46 +0.2 521,964 - PP_0435 0.47 -3.1 522,017 + PP_0435 0.50 -0.7 522,113 + PP_0435 0.57 -0.3 522,113 + PP_0435 0.57 -0.3 522,125 - PP_0435 0.58 +0.2 522,159 - PP_0435 0.60 -0.2 522,367 - PP_0435 0.75 -0.6 522,622 + -0.4 522,623 - +0.3 522,686 + -0.3 522,687 - -0.3 522,789 + +0.1 522,873 + +0.2 524,148 + -0.5 524,148 + +0.8 524,148 + +0.2 524,148 + +0.7 524,148 + -0.5 524,148 + +0.1 524,148 + +0.8 524,149 - -0.1 524,149 - -0.1 524,149 - -1.3 524,149 - +1.8 524,149 - +3.3 524,149 - -0.4 524,149 - +0.2 524,149 - -0.0 524,149 - +0.2 524,149 - +0.6 524,149 - +0.3 524,149 - -0.2 524,149 - +0.1 524,152 + +0.3 524,152 + -0.9 524,152 + -0.6 524,152 + -0.4 524,152 + -0.3 524,152 + +0.9 524,152 + +0.4 524,152 + -0.3 524,153 - -0.8 524,153 - +0.5 524,153 - -0.1 524,153 - -0.3 524,153 - +0.2 524,153 - +0.1 524,153 - -2.1 524,153 - -0.6 524,154 + -0.1 524,154 + -1.1 524,154 + -0.3 524,154 + +0.7 524,155 - +0.2 524,155 - +0.3 524,155 - +0.0 524,155 - +1.2 524,156 + +0.2 524,156 + -0.1 524,156 + +0.2 524,156 + -0.6 524,156 + +0.7 524,156 + +0.2 524,157 - -0.6 524,157 - -0.2 524,157 - +0.3 524,157 - +0.2 524,157 - -0.7 524,157 - +0.3 524,174 + +0.1 524,217 + +0.3 524,332 - +1.1 524,332 - +0.4 524,370 - +0.5 524,370 - -2.9 524,370 - -0.2
Or see this region's nucleotide sequence