Experiment: D-Glucose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PP_0099 and PP_0100 are separated by 306 nucleotides PP_0100 and PP_0101 are separated by 207 nucleotides
PP_0099: PP_0099 - conserved protein of unknown function, at 103,842 to 104,900
_0099
PP_0100: PP_0100 - carbonic anhydrase, at 105,207 to 105,926
_0100
PP_0101: PP_0101 - putative sulfate transporter, at 106,134 to 107,651
_0101
Position (kb) 105
106 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 104.266 kb on + strand, within PP_0099 at 104.266 kb on + strand, within PP_0099 at 104.293 kb on + strand, within PP_0099 at 104.294 kb on - strand, within PP_0099 at 104.610 kb on + strand, within PP_0099 at 104.611 kb on - strand, within PP_0099 at 104.611 kb on - strand, within PP_0099 at 104.611 kb on - strand, within PP_0099 at 104.611 kb on - strand, within PP_0099 at 104.663 kb on - strand, within PP_0099 at 104.733 kb on + strand, within PP_0099 at 104.734 kb on - strand, within PP_0099 at 104.734 kb on - strand, within PP_0099 at 104.773 kb on + strand, within PP_0099 at 104.774 kb on - strand, within PP_0099 at 104.949 kb on + strand at 104.953 kb on - strand at 104.963 kb on - strand at 104.963 kb on - strand at 104.974 kb on + strand at 104.975 kb on - strand at 104.975 kb on - strand at 105.044 kb on - strand at 105.087 kb on + strand at 105.087 kb on + strand at 105.087 kb on + strand at 105.087 kb on + strand at 105.088 kb on - strand at 105.088 kb on - strand at 105.088 kb on - strand at 105.088 kb on - strand at 105.088 kb on - strand at 105.091 kb on + strand at 105.092 kb on - strand at 105.092 kb on - strand at 105.092 kb on - strand at 105.116 kb on + strand at 105.116 kb on + strand at 105.117 kb on - strand at 105.117 kb on - strand at 105.117 kb on - strand at 105.117 kb on - strand at 105.117 kb on - strand at 105.148 kb on + strand at 105.149 kb on - strand at 105.149 kb on - strand at 105.179 kb on + strand at 105.179 kb on + strand at 105.183 kb on + strand at 105.922 kb on - strand at 105.924 kb on + strand at 105.924 kb on + strand at 105.924 kb on + strand at 105.924 kb on + strand at 105.925 kb on - strand at 105.954 kb on + strand at 106.101 kb on - strand at 106.127 kb on + strand at 106.127 kb on + strand at 106.128 kb on - strand at 106.128 kb on - strand at 106.128 kb on - strand at 106.251 kb on - strand at 106.333 kb on + strand, within PP_0101 at 106.334 kb on - strand, within PP_0101 at 106.470 kb on + strand, within PP_0101 at 106.717 kb on + strand, within PP_0101 at 106.718 kb on - strand, within PP_0101 at 106.743 kb on - strand, within PP_0101 at 106.743 kb on - strand, within PP_0101 at 106.850 kb on + strand, within PP_0101 at 106.851 kb on - strand, within PP_0101 at 106.921 kb on + strand, within PP_0101 at 106.921 kb on + strand, within PP_0101
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucose (C) remove 104,266 + PP_0099 0.40 +0.2 104,266 + PP_0099 0.40 +0.4 104,293 + PP_0099 0.43 +0.4 104,294 - PP_0099 0.43 +0.0 104,610 + PP_0099 0.73 -0.6 104,611 - PP_0099 0.73 -0.1 104,611 - PP_0099 0.73 +0.7 104,611 - PP_0099 0.73 -0.0 104,611 - PP_0099 0.73 +0.5 104,663 - PP_0099 0.78 +0.3 104,733 + PP_0099 0.84 -0.4 104,734 - PP_0099 0.84 -0.3 104,734 - PP_0099 0.84 -0.0 104,773 + PP_0099 0.88 -0.3 104,774 - PP_0099 0.88 -1.9 104,949 + +0.6 104,953 - +0.1 104,963 - +0.4 104,963 - -0.3 104,974 + +0.1 104,975 - -0.9 104,975 - -1.1 105,044 - -0.2 105,087 + +0.8 105,087 + -0.2 105,087 + +0.2 105,087 + -0.9 105,088 - +0.5 105,088 - -0.1 105,088 - -3.2 105,088 - +0.3 105,088 - -0.6 105,091 + -0.3 105,092 - +0.1 105,092 - -0.9 105,092 - +1.4 105,116 + +1.3 105,116 + +0.3 105,117 - -0.5 105,117 - -2.3 105,117 - +0.1 105,117 - -1.2 105,117 - +0.1 105,148 + -1.3 105,149 - -0.4 105,149 - -0.4 105,179 + -0.6 105,179 + +0.4 105,183 + +1.2 105,922 - -1.6 105,924 + -0.2 105,924 + -1.0 105,924 + -1.9 105,924 + -1.5 105,925 - +2.1 105,954 + -0.5 106,101 - +0.2 106,127 + +0.6 106,127 + -0.2 106,128 - -0.2 106,128 - -0.4 106,128 - -0.4 106,251 - -0.4 106,333 + PP_0101 0.13 +0.9 106,334 - PP_0101 0.13 +0.1 106,470 + PP_0101 0.22 +1.0 106,717 + PP_0101 0.38 +0.6 106,718 - PP_0101 0.38 +0.7 106,743 - PP_0101 0.40 -0.5 106,743 - PP_0101 0.40 -0.6 106,850 + PP_0101 0.47 -1.1 106,851 - PP_0101 0.47 +1.4 106,921 + PP_0101 0.52 -0.0 106,921 + PP_0101 0.52 +0.3
Or see this region's nucleotide sequence