Experiment: D,L-Malic Acid (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Atu2100 and Atu2101 overlap by 1 nucleotides Atu2101 and Atu2102 are separated by 1 nucleotides Atu2102 and Atu2103 are separated by 14 nucleotides
Atu2100: Atu2100 - penicillin binding protein 2, at 2,065,236 to 2,066,978
Atu2100
Atu2101: Atu2101 - hypothetical protein, at 2,066,978 to 2,067,544
Atu2101
Atu2102: Atu2102 - S-adenosyl methionine-dependent methytransferase, at 2,067,546 to 2,068,571
Atu2102
Atu2103: Atu2103 - hypothetical protein, at 2,068,586 to 2,069,026
Atu2103
Position (kb)
2067
2068
2069 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 2067.003 kb on - strand at 2069.075 kb on - strand at 2069.295 kb on - strand at 2069.443 kb on + strand at 2069.443 kb on + strand at 2069.451 kb on - strand at 2069.451 kb on - strand at 2069.451 kb on - strand at 2069.451 kb on - strand at 2069.487 kb on + strand at 2069.487 kb on + strand at 2069.495 kb on - strand at 2069.506 kb on + strand at 2069.523 kb on + strand at 2069.524 kb on - strand at 2069.534 kb on - strand at 2069.534 kb on - strand at 2069.534 kb on - strand at 2069.534 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction D,L-Malic Acid (C) remove 2,067,003 - -2.8 2,069,075 - +0.0 2,069,295 - -0.3 2,069,443 + +0.9 2,069,443 + -0.3 2,069,451 - -0.1 2,069,451 - -0.1 2,069,451 - -0.3 2,069,451 - +0.1 2,069,487 + +0.4 2,069,487 + -0.0 2,069,495 - -0.2 2,069,506 + +0.1 2,069,523 + +0.4 2,069,524 - +0.1 2,069,534 - -1.3 2,069,534 - -1.2 2,069,534 - +0.3 2,069,534 - +0.5
Or see this region's nucleotide sequence