Strain Fitness in Agrobacterium fabrum C58 around Atu1948

Experiment: D,L-Malic Acid (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntAtu1946 and Atu1947 are separated by 168 nucleotidesAtu1947 and Atu1948 are separated by 310 nucleotidesAtu1948 and Atu1949 are separated by 66 nucleotides Atu1946: Atu1946 - 50S ribosomal protein L3, at 1,914,600 to 1,915,241 Atu1946 Atu1947: Atu1947 - 30S ribosomal protein S10, at 1,915,410 to 1,915,718 Atu1947 Atu1948: Atu1948 - elongation factor TU, at 1,916,029 to 1,917,204 Atu1948 Atu1949: Atu1949 - translation elongation factor G, at 1,917,271 to 1,919,370 Atu1949 Position (kb) 1916 1917 1918Strain fitness (log2 ratio) -1 0 1at 1915.994 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction D,L-Malic Acid (C)
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1,915,994 - +0.0

Or see this region's nucleotide sequence