Experiment: D,L-Malic Acid (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Atu0914 and Atu0915 overlap by 4 nucleotides Atu0915 and Atu0916 are separated by 433 nucleotides Atu0916 and Atu0917 are separated by 302 nucleotides Atu0917 and Atu0918 overlap by 8 nucleotides
Atu0914: Atu0914 - Na+/H+ antiporter, at 904,152 to 904,538
Atu0914
Atu0915: Atu0915 - Na+/H+ antiporter, at 904,535 to 904,867
Atu0915
Atu0916: Atu0916 - transcriptional regulator, at 905,301 to 905,729
Atu0916
Atu0917: Atu0917 - hypothetical protein, at 906,032 to 906,454
Atu0917
Atu0918: Atu0918 - hypothetical protein, at 906,447 to 907,283
Atu0918
Position (kb) 905
906 Strain fitness (log2 ratio) -1
0
1 at 905.221 kb on + strand at 905.433 kb on + strand, within Atu0916 at 905.772 kb on + strand at 905.788 kb on - strand at 906.142 kb on + strand, within Atu0917 at 906.270 kb on - strand, within Atu0917 at 906.324 kb on - strand, within Atu0917 at 906.324 kb on - strand, within Atu0917 at 906.351 kb on + strand, within Atu0917 at 906.383 kb on - strand, within Atu0917 at 906.385 kb on + strand, within Atu0917 at 906.393 kb on - strand, within Atu0917 at 906.403 kb on - strand, within Atu0917 at 906.711 kb on - strand, within Atu0918
Per-strain Table
Position Strand Gene LocusTag Fraction D,L-Malic Acid (C) remove 905,221 + -0.5 905,433 + Atu0916 0.31 -0.2 905,772 + +0.7 905,788 - +0.1 906,142 + Atu0917 0.26 -0.0 906,270 - Atu0917 0.56 +0.4 906,324 - Atu0917 0.69 -0.2 906,324 - Atu0917 0.69 -0.0 906,351 + Atu0917 0.75 -0.0 906,383 - Atu0917 0.83 +0.3 906,385 + Atu0917 0.83 +0.3 906,393 - Atu0917 0.85 +0.5 906,403 - Atu0917 0.88 -0.2 906,711 - Atu0918 0.32 +0.4
Or see this region's nucleotide sequence