Experiment: D,L-Malic Acid (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Atu0695 and Atu0696 overlap by 7 nucleotides Atu0696 and Atu0697 are separated by 204 nucleotides Atu0697 and Atu0698 overlap by 4 nucleotides Atu0698 and Atu0699 are separated by 152 nucleotides
Atu0695: Atu0695 - 3-deoxy-D-manno-octulosonic acid transferase-like protein, at 693,451 to 694,773
Atu0695
Atu0696: Atu0696 - phosphatase, at 694,767 to 695,504
Atu0696
Atu0697: Atu0697 - tetraacyldisaccharide 4'-kinase, at 695,709 to 696,755
Atu0697
Atu0698: Atu0698 - hypothetical protein, at 696,752 to 696,985
Atu0698
Atu0699: Atu0699 - DNA mismatch repair protein MutL, at 697,138 to 698,958
Atu0699
Position (kb) 695
696
697 Strain fitness (log2 ratio) -2
-1
0
1 at 694.710 kb on - strand at 694.712 kb on + strand at 694.799 kb on + strand at 694.807 kb on - strand at 694.906 kb on - strand, within Atu0696 at 694.965 kb on - strand, within Atu0696 at 694.973 kb on - strand, within Atu0696 at 695.134 kb on + strand, within Atu0696 at 695.134 kb on + strand, within Atu0696 at 695.135 kb on + strand, within Atu0696 at 695.142 kb on - strand, within Atu0696 at 695.143 kb on - strand, within Atu0696 at 695.149 kb on + strand, within Atu0696 at 695.508 kb on - strand at 695.656 kb on + strand at 696.763 kb on - strand at 696.819 kb on + strand, within Atu0698 at 696.827 kb on - strand, within Atu0698 at 696.896 kb on - strand, within Atu0698 at 696.896 kb on - strand, within Atu0698 at 696.908 kb on + strand, within Atu0698 at 697.022 kb on - strand at 697.062 kb on + strand at 697.099 kb on - strand at 697.104 kb on - strand at 697.104 kb on - strand at 697.134 kb on + strand at 697.220 kb on - strand at 697.311 kb on - strand at 697.425 kb on + strand, within Atu0699 at 697.738 kb on + strand, within Atu0699
Per-strain Table
Position Strand Gene LocusTag Fraction D,L-Malic Acid (C) remove 694,710 - -1.5 694,712 + -0.2 694,799 + +0.1 694,807 - -0.1 694,906 - Atu0696 0.19 +0.2 694,965 - Atu0696 0.27 +0.2 694,973 - Atu0696 0.28 -0.3 695,134 + Atu0696 0.50 +0.2 695,134 + Atu0696 0.50 +0.2 695,135 + Atu0696 0.50 +0.4 695,142 - Atu0696 0.51 +0.2 695,143 - Atu0696 0.51 +0.8 695,149 + Atu0696 0.52 -1.5 695,508 - -2.6 695,656 + +0.3 696,763 - -1.3 696,819 + Atu0698 0.29 -0.1 696,827 - Atu0698 0.32 -0.8 696,896 - Atu0698 0.62 +1.0 696,896 - Atu0698 0.62 -0.6 696,908 + Atu0698 0.67 +0.1 697,022 - +0.3 697,062 + +0.5 697,099 - -0.2 697,104 - +0.1 697,104 - -0.2 697,134 + +0.2 697,220 - -0.7 697,311 - +0.0 697,425 + Atu0699 0.16 +0.3 697,738 + Atu0699 0.33 -0.5
Or see this region's nucleotide sequence