Strain Fitness in Escherichia coli BW25113 around b4419

Experiment: LB, Aerobic

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntkdsA and ldrA are separated by 148 nucleotidesldrA and rdlA are separated by 47 nucleotidesrdlA and ldrB are separated by 313 nucleotidesldrB and rdlB are separated by 47 nucleotidesrdlB and ldrC are separated by 314 nucleotides b1215: kdsA - 2-dehydro-3-deoxyphosphooctonate aldolase (NCBI), at 1,267,388 to 1,268,242 kdsA b4419: ldrA - toxic polypeptide, small (NCBI), at 1,268,391 to 1,268,498 ldrA b4420: rdlA - regulatory antisense RNA (NCBI), at 1,268,546 to 1,268,612 rdlA b4421: ldrB - toxic polypeptide, small (NCBI), at 1,268,926 to 1,269,033 ldrB b4422: rdlB - regulatory antisense sRNA (NCBI), at 1,269,081 to 1,269,146 rdlB b4423: ldrC - toxic polypeptide, small (NCBI), at 1,269,461 to 1,269,568 ldrC Position (kb) 1268 1269Strain fitness (log2 ratio) -1 0 1at 1268.787 kb on + strandat 1268.787 kb on + strandat 1269.230 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction LB, Aerobic
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1,268,787 + -0.4
1,268,787 + -0.9
1,269,230 + -0.2

Or see this region's nucleotide sequence