Strain Fitness in Escherichia coli BW25113 around b3724

Experiment: LB, Aerobic

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntbglG and phoU are separated by 285 nucleotidesphoU and pstB are separated by 14 nucleotidespstB and pstA are separated by 182 nucleotides b3723: bglG - transcriptional antiterminator of the bgl operon (NCBI), at 3,903,754 to 3,904,590 bglG b3724: phoU - negative regulator of PhoR/PhoB two-component regulator (NCBI), at 3,904,876 to 3,905,601 phoU b3725: pstB - phosphate transporter subunit (NCBI), at 3,905,616 to 3,906,389 pstB b3726: pstA - phosphate transporter subunit (NCBI), at 3,906,572 to 3,907,462 pstA Position (kb) 3904 3905 3906Strain fitness (log2 ratio) -2 -1 0 1 2at 3903.978 kb on - strand, within bglGat 3903.978 kb on - strand, within bglGat 3904.059 kb on - strand, within bglGat 3904.065 kb on - strand, within bglGat 3904.065 kb on - strand, within bglGat 3904.067 kb on - strand, within bglGat 3904.076 kb on - strand, within bglGat 3904.076 kb on - strand, within bglGat 3904.076 kb on - strand, within bglGat 3904.103 kb on - strand, within bglGat 3904.103 kb on - strand, within bglGat 3904.103 kb on - strand, within bglGat 3904.103 kb on - strand, within bglGat 3904.103 kb on - strand, within bglGat 3904.113 kb on - strand, within bglGat 3904.143 kb on + strand, within bglGat 3904.149 kb on - strand, within bglGat 3904.170 kb on - strand, within bglGat 3904.195 kb on - strand, within bglGat 3904.195 kb on - strand, within bglGat 3904.201 kb on - strand, within bglGat 3904.202 kb on - strand, within bglGat 3904.202 kb on - strand, within bglGat 3904.206 kb on - strand, within bglGat 3904.214 kb on + strand, within bglGat 3904.241 kb on - strand, within bglGat 3904.244 kb on + strand, within bglGat 3904.247 kb on + strand, within bglGat 3904.290 kb on + strand, within bglGat 3904.295 kb on + strand, within bglGat 3904.295 kb on + strand, within bglGat 3904.305 kb on + strand, within bglGat 3904.313 kb on - strand, within bglGat 3904.336 kb on + strand, within bglGat 3904.343 kb on + strand, within bglGat 3904.375 kb on + strand, within bglGat 3904.377 kb on + strand, within bglGat 3904.377 kb on + strand, within bglGat 3904.386 kb on - strand, within bglGat 3904.388 kb on - strand, within bglGat 3904.401 kb on - strand, within bglGat 3904.420 kb on - strand, within bglGat 3904.420 kb on - strand, within bglGat 3904.422 kb on + strand, within bglGat 3904.430 kb on - strand, within bglGat 3904.515 kb on - strandat 3904.668 kb on + strandat 3904.668 kb on + strandat 3904.798 kb on - strandat 3904.861 kb on - strandat 3904.868 kb on - strandat 3904.896 kb on - strandat 3904.930 kb on - strandat 3905.604 kb on - strandat 3905.604 kb on - strandat 3905.604 kb on - strandat 3905.608 kb on + strandat 3905.665 kb on - strandat 3905.700 kb on + strand, within pstBat 3906.128 kb on + strand, within pstBat 3906.136 kb on - strand, within pstBat 3906.381 kb on - strandat 3906.387 kb on - strandat 3906.468 kb on - strandat 3906.483 kb on + strandat 3906.493 kb on - strandat 3906.493 kb on - strandat 3906.524 kb on - strandat 3906.526 kb on + strandat 3906.538 kb on + strandat 3906.538 kb on + strandat 3906.538 kb on + strandat 3906.538 kb on + strandat 3906.546 kb on - strandat 3906.546 kb on - strandat 3906.546 kb on - strandat 3906.546 kb on - strandat 3906.546 kb on - strandat 3906.574 kb on - strandat 3906.574 kb on - strandat 3906.579 kb on + strandat 3906.587 kb on - strandat 3906.587 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction LB, Aerobic
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3,903,978 - bglG b3723 0.27 +2.3
3,903,978 - bglG b3723 0.27 +2.3
3,904,059 - bglG b3723 0.36 +2.3
3,904,065 - bglG b3723 0.37 +0.7
3,904,065 - bglG b3723 0.37 +2.3
3,904,067 - bglG b3723 0.37 +2.3
3,904,076 - bglG b3723 0.38 +2.3
3,904,076 - bglG b3723 0.38 +2.3
3,904,076 - bglG b3723 0.38 +2.3
3,904,103 - bglG b3723 0.42 +2.3
3,904,103 - bglG b3723 0.42 +1.3
3,904,103 - bglG b3723 0.42 +1.3
3,904,103 - bglG b3723 0.42 +1.3
3,904,103 - bglG b3723 0.42 +2.3
3,904,113 - bglG b3723 0.43 -0.0
3,904,143 + bglG b3723 0.46 +2.3
3,904,149 - bglG b3723 0.47 +2.3
3,904,170 - bglG b3723 0.50 +2.3
3,904,195 - bglG b3723 0.53 +2.3
3,904,195 - bglG b3723 0.53 +2.3
3,904,201 - bglG b3723 0.53 +2.3
3,904,202 - bglG b3723 0.54 +2.3
3,904,202 - bglG b3723 0.54 +2.3
3,904,206 - bglG b3723 0.54 +0.1
3,904,214 + bglG b3723 0.55 +1.3
3,904,241 - bglG b3723 0.58 +2.3
3,904,244 + bglG b3723 0.59 +0.9
3,904,247 + bglG b3723 0.59 -0.8
3,904,290 + bglG b3723 0.64 -0.7
3,904,295 + bglG b3723 0.65 -0.1
3,904,295 + bglG b3723 0.65 -0.3
3,904,305 + bglG b3723 0.66 +1.3
3,904,313 - bglG b3723 0.67 +2.3
3,904,336 + bglG b3723 0.70 +0.3
3,904,343 + bglG b3723 0.70 +0.7
3,904,375 + bglG b3723 0.74 +2.3
3,904,377 + bglG b3723 0.74 +2.3
3,904,377 + bglG b3723 0.74 +2.3
3,904,386 - bglG b3723 0.76 +2.3
3,904,388 - bglG b3723 0.76 +2.3
3,904,401 - bglG b3723 0.77 +2.3
3,904,420 - bglG b3723 0.80 +2.3
3,904,420 - bglG b3723 0.80 +2.3
3,904,422 + bglG b3723 0.80 +1.3
3,904,430 - bglG b3723 0.81 +2.3
3,904,515 - +2.3
3,904,668 + +0.3
3,904,668 + +2.3
3,904,798 - -0.7
3,904,861 - -1.7
3,904,868 - -0.7
3,904,896 - +1.1
3,904,930 - +1.1
3,905,604 - +1.3
3,905,604 - -2.0
3,905,604 - +1.2
3,905,608 + -0.9
3,905,665 - +1.3
3,905,700 + pstB b3725 0.11 +1.3
3,906,128 + pstB b3725 0.66 +2.3
3,906,136 - pstB b3725 0.67 +2.3
3,906,381 - -1.4
3,906,387 - -1.1
3,906,468 - +0.2
3,906,483 + -0.9
3,906,493 - +1.3
3,906,493 - +1.8
3,906,524 - -0.5
3,906,526 + -0.9
3,906,538 + +1.3
3,906,538 + -0.5
3,906,538 + -0.3
3,906,538 + -0.5
3,906,546 - +0.3
3,906,546 - -0.8
3,906,546 - +0.4
3,906,546 - +1.0
3,906,546 - +0.9
3,906,574 - -0.8
3,906,574 - -1.4
3,906,579 + -0.3
3,906,587 - -0.6
3,906,587 - +0.5

Or see this region's nucleotide sequence