Strain Fitness in Escherichia coli BW25113 around b2192

Experiment: LB, Aerobic

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntyejO and insH-8 are separated by 150 nucleotidesinsH-8 and narP are separated by 418 nucleotides b2190: yejO - predicted autotransporter outer membrane protein (RefSeq), at 2,284,412 to 2,286,936 yejO b2192: insH-8 - IS5 transposase and trans-activator (NCBI), at 2,287,087 to 2,288,103 insH-8 b2193: narP - DNA-binding response regulator in two-component regulatory system with NarQ or NarX (NCBI), at 2,288,522 to 2,289,169 narP Position (kb) 2287 2288 2289Strain fitness (log2 ratio) -1 0 1at 2286.102 kb on + strand, within yejOat 2286.118 kb on + strand, within yejOat 2286.121 kb on + strand, within yejOat 2286.121 kb on - strand, within yejOat 2286.121 kb on - strand, within yejOat 2286.165 kb on - strand, within yejOat 2286.165 kb on - strand, within yejOat 2286.301 kb on - strand, within yejOat 2286.302 kb on - strand, within yejOat 2286.319 kb on + strand, within yejOat 2286.327 kb on - strand, within yejOat 2286.330 kb on + strandat 2286.430 kb on - strand, within yejOat 2286.432 kb on + strand, within yejOat 2286.462 kb on + strandat 2286.470 kb on - strand, within yejOat 2286.470 kb on - strand, within yejOat 2286.531 kb on + strand, within yejOat 2286.532 kb on + strand, within yejOat 2286.541 kb on + strand, within yejOat 2286.554 kb on + strand, within yejOat 2286.554 kb on + strand, within yejOat 2286.573 kb on - strand, within yejOat 2286.621 kb on + strand, within yejOat 2286.623 kb on + strand, within yejOat 2286.623 kb on + strand, within yejOat 2286.631 kb on - strand, within yejOat 2286.643 kb on + strand, within yejOat 2286.644 kb on - strand, within yejOat 2286.654 kb on + strand, within yejOat 2286.654 kb on + strand, within yejOat 2286.676 kb on - strand, within yejOat 2286.681 kb on - strand, within yejOat 2286.681 kb on - strand, within yejOat 2286.725 kb on + strandat 2286.750 kb on + strandat 2286.751 kb on - strandat 2286.751 kb on - strandat 2286.878 kb on - strandat 2286.880 kb on - strandat 2286.885 kb on - strandat 2286.888 kb on - strandat 2286.888 kb on - strandat 2286.890 kb on - strandat 2286.892 kb on - strandat 2286.892 kb on - strandat 2286.892 kb on - strandat 2286.892 kb on - strandat 2286.892 kb on - strandat 2286.901 kb on - strandat 2286.901 kb on - strandat 2286.902 kb on - strandat 2286.902 kb on - strandat 2286.902 kb on - strandat 2286.902 kb on - strandat 2286.902 kb on - strandat 2286.902 kb on - strandat 2286.902 kb on - strandat 2286.902 kb on - strandat 2286.902 kb on - strandat 2286.902 kb on - strandat 2286.902 kb on - strandat 2286.912 kb on - strandat 2286.912 kb on - strandat 2286.924 kb on - strandat 2286.931 kb on - strandat 2286.931 kb on - strandat 2286.943 kb on - strandat 2286.943 kb on - strandat 2286.975 kb on - strandat 2286.975 kb on - strandat 2286.980 kb on - strandat 2288.109 kb on + strandat 2288.192 kb on + strandat 2288.192 kb on + strandat 2288.257 kb on + strandat 2288.257 kb on + strandat 2288.583 kb on + strandat 2288.583 kb on + strandat 2288.591 kb on - strand, within narPat 2288.591 kb on - strand, within narPat 2288.621 kb on - strand, within narPat 2288.621 kb on - strand, within narPat 2288.730 kb on + strand, within narPat 2288.746 kb on - strand, within narPat 2288.779 kb on + strand, within narPat 2288.929 kb on + strand, within narPat 2288.929 kb on + strand, within narPat 2288.987 kb on - strand, within narPat 2289.070 kb on + strand, within narP

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Per-strain Table

Position Strand Gene LocusTag Fraction LB, Aerobic
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2,286,102 + yejO b2190 0.67 +1.5
2,286,118 + yejO b2190 0.68 +1.7
2,286,121 + yejO b2190 0.68 -1.1
2,286,121 - yejO b2190 0.68 -0.7
2,286,121 - yejO b2190 0.68 +0.2
2,286,165 - yejO b2190 0.69 +0.5
2,286,165 - yejO b2190 0.69 +0.5
2,286,301 - yejO b2190 0.75 -1.3
2,286,302 - yejO b2190 0.75 -0.5
2,286,319 + yejO b2190 0.76 +1.5
2,286,327 - yejO b2190 0.76 -0.8
2,286,330 + +0.5
2,286,430 - yejO b2190 0.80 +1.5
2,286,432 + yejO b2190 0.80 +1.5
2,286,462 + -0.9
2,286,470 - yejO b2190 0.82 +0.9
2,286,470 - yejO b2190 0.82 +0.5
2,286,531 + yejO b2190 0.84 +0.5
2,286,532 + yejO b2190 0.84 +1.5
2,286,541 + yejO b2190 0.84 +0.5
2,286,554 + yejO b2190 0.85 +0.5
2,286,554 + yejO b2190 0.85 -1.3
2,286,573 - yejO b2190 0.86 -1.4
2,286,621 + yejO b2190 0.87 +1.2
2,286,623 + yejO b2190 0.88 +0.2
2,286,623 + yejO b2190 0.88 +0.5
2,286,631 - yejO b2190 0.88 +1.5
2,286,643 + yejO b2190 0.88 +0.2
2,286,644 - yejO b2190 0.88 +0.5
2,286,654 + yejO b2190 0.89 +1.5
2,286,654 + yejO b2190 0.89 -0.1
2,286,676 - yejO b2190 0.90 -0.8
2,286,681 - yejO b2190 0.90 +1.5
2,286,681 - yejO b2190 0.90 -0.5
2,286,725 + +0.4
2,286,750 + -0.1
2,286,751 - +0.2
2,286,751 - -0.1
2,286,878 - +0.4
2,286,880 - -0.9
2,286,885 - +0.3
2,286,888 - -0.5
2,286,888 - -0.1
2,286,890 - +0.4
2,286,892 - -0.5
2,286,892 - +0.1
2,286,892 - -0.2
2,286,892 - +0.7
2,286,892 - +0.1
2,286,901 - +0.3
2,286,901 - -0.4
2,286,902 - -0.6
2,286,902 - +0.6
2,286,902 - -0.9
2,286,902 - -0.1
2,286,902 - +0.5
2,286,902 - -0.5
2,286,902 - -0.4
2,286,902 - +0.1
2,286,902 - -0.1
2,286,902 - -0.2
2,286,902 - -0.2
2,286,912 - +0.5
2,286,912 - -0.1
2,286,924 - +0.2
2,286,931 - -0.1
2,286,931 - -1.4
2,286,943 - -1.1
2,286,943 - -0.6
2,286,975 - +0.4
2,286,975 - -0.2
2,286,980 - +0.5
2,288,109 + -0.1
2,288,192 + -0.5
2,288,192 + -0.5
2,288,257 + +0.4
2,288,257 + +0.1
2,288,583 + +0.4
2,288,583 + -1.1
2,288,591 - narP b2193 0.11 -1.1
2,288,591 - narP b2193 0.11 -0.2
2,288,621 - narP b2193 0.15 -0.8
2,288,621 - narP b2193 0.15 +0.3
2,288,730 + narP b2193 0.32 +0.2
2,288,746 - narP b2193 0.35 -0.5
2,288,779 + narP b2193 0.40 +0.1
2,288,929 + narP b2193 0.63 +1.5
2,288,929 + narP b2193 0.63 +0.6
2,288,987 - narP b2193 0.72 -0.4
2,289,070 + narP b2193 0.85 +0.4

Or see this region's nucleotide sequence