Specific Phenotypes for Escherichia coli BW25113 in plasmid transformation experiments

Condition Gene Description Fitness Cons.
Kanamycin sulfate b0065 conserved inner membrane protein (NCBI) +1.5  
Kanamycin sulfate b0081 hypothetical protein (NCBI) +1.6  
Kanamycin sulfate b0190 hypothetical protein (NCBI) +1.8  
Kanamycin sulfate b0382 hypothetical protein (NCBI) -1.4  
Kanamycin sulfate b0393 recombination associated protein (NCBI) +1.7  
Kanamycin sulfate b0418 phosphatidylglycerophosphatase A (NCBI) -4.5  
Kanamycin sulfate b0427 putative transport protein (VIMSS) +4.2  
Kanamycin sulfate b0441 peptidyl-prolyl cis-trans isomerase (rotamase D) (NCBI) -5.6  
Kanamycin sulfate b0458 orf, hypothetical protein (VIMSS) +2.8  
Kanamycin sulfate b0460 modulator of gene expression, with H-NS (NCBI) variable  
Kanamycin sulfate b0473 heat shock protein 90 (NCBI) +1.3  
Kanamycin sulfate b0636 hypothetical protein (NCBI) +1.8  
Kanamycin sulfate b0661 isopentenyl-adenosine A37 tRNA methylthiolase (NCBI) -1.9  
Kanamycin sulfate b0761 DNA-binding transcriptional dual regulator (NCBI) +1.2  
Kanamycin sulfate b0779 excinuclease ABC subunit B (NCBI) +1.1  
Kanamycin sulfate b0869 putative dTDP-glucose enzyme (VIMSS) +1.5  
Kanamycin sulfate b0931 nicotinate phosphoribosyltransferase (NCBI) +1.6  
Kanamycin sulfate b0932 aminopeptidase N (NCBI) variable  
Kanamycin sulfate b0970 inner membrane protein (NCBI) -4.7  
Kanamycin sulfate b1086 23S rRNA pseudouridylate synthase (NCBI) +2.2  
Kanamycin sulfate b1088 hypothetical protein (NCBI) +2.2  
Kanamycin sulfate b1162 predicted DNA-binding transcriptional regulator (NCBI) +2.3  
Kanamycin sulfate b1213 predicted transcriptional regulator (NCBI) +1.5  
Kanamycin sulfate b1234 conserved protein (RefSeq) +2.3  
Kanamycin sulfate b1294 predicted antimicrobial peptide transporter subunit (NCBI) +1.3  
Kanamycin sulfate b1320 predicted DNA-binding transcriptional regulator (NCBI) variable  
Kanamycin sulfate b1329 putative transport periplasmic protein (VIMSS) +1.8  
Kanamycin sulfate b1422 putative transcriptional regulator LYSR-type (VIMSS) -5.8  
Kanamycin sulfate b1439 fused predicted DNA-binding transcriptional regulator/predicted amino transferase (NCBI) +1.2  
Kanamycin sulfate b1612 fumarate hydratase (fumarase A), aerobic Class I (NCBI) +3.1  
Kanamycin sulfate b1629 electron transport complex protein RnfC (NCBI) -2.0  
Kanamycin sulfate b1632 NADH-ubiquinone oxidoreductase (NCBI) variable  
Kanamycin sulfate b1777 orf, hypothetical protein (VIMSS) +2.1  
Kanamycin sulfate b1835 putative nucleolar proteins (VIMSS) +4.7  
Kanamycin sulfate b1840 predicted inner membrane protein (NCBI) +1.9  
Kanamycin sulfate b1854 pyruvate kinase (NCBI) variable  
Kanamycin sulfate b1878 hypothetical protein (NCBI) -1.8  
Kanamycin sulfate b1891 DNA-binding transcriptional dual regulator with FlhD (NCBI) +1.7  
Kanamycin sulfate b2014 putative amino acid/amine transport protein (VIMSS) variable  
Kanamycin sulfate b2037 predicted polisoprenol-linked O-antigen transporter (NCBI) -2.9  
Kanamycin sulfate b2039 glucose-1-phosphate thymidylyltransferase (NCBI) -1.9  
Kanamycin sulfate b2101 predicted DNA-binding transcriptional regulator (NCBI) -5.1  
Kanamycin sulfate b2113 putative ATPase (VIMSS) +4.5  
Kanamycin sulfate b2148 beta-methylgalactoside transporter inner membrane component (NCBI) variable  
Kanamycin sulfate b2149 fused methyl-galactoside transporter subunits of ABC superfamily: ATP-binding components (NCBI) variable  
Kanamycin sulfate b2150 methyl-galactoside transporter subunit (NCBI) variable  
Kanamycin sulfate b2156 lysine transporter (NCBI) variable  
Kanamycin sulfate b2181 hypothetical protein (NCBI) +2.0  
Kanamycin sulfate b2216 phosphotransfer intermediate protein in two-component regulatory system with RcsBC (NCBI) +3.9  
Kanamycin sulfate b2218 hybrid sensory kinase in two-component regulatory system with RcsB and YojN (RefSeq) +3.1  
Kanamycin sulfate b2260 O-succinylbenzoic acid--CoA ligase (NCBI) -1.6  
Kanamycin sulfate b2295 hypothetical protein (NCBI) -2.9  
Kanamycin sulfate b2392 manganese transport protein MntH (NCBI) +1.4  
Kanamycin sulfate b2436 coproporphyrinogen III oxidase (NCBI) +3.7  
Kanamycin sulfate b2480 thioredoxin-dependent thiol peroxidase (NCBI) +1.5  
Kanamycin sulfate b2502 exopolyphosphatase (NCBI) +2.5  
Kanamycin sulfate b2522 enhanced serine sensitivity (VIMSS) +2.1  
Kanamycin sulfate b2532 predicted methyltransferase (NCBI) variable  
Kanamycin sulfate b2584 fused predicted acyl-CoA synthetase: NAD(P)-binding subunit/ATP-binding subunit (NCBI) +2.1  
Kanamycin sulfate b2587 alpha-ketoglutarate transporter (NCBI) +2.5  
Kanamycin sulfate b2707 DNA-bindng transcriptional repressor (NCBI) -3.2  
Kanamycin sulfate b2714 DNA-binding transcriptional repressor (NCBI) -1.6  
Kanamycin sulfate b2743 protein-L-isoaspartate O-methyltransferase (NCBI) +2.7  
Kanamycin sulfate b2786 hybrid sensory histidine kinase, in two-component regulatory system with UvrY (NCBI) -1.1  
Kanamycin sulfate b2796 predicted serine transporter (NCBI) -3.1  
Kanamycin sulfate b2812 hypothetical protein (NCBI) +1.6  
Kanamycin sulfate b2819 exonuclease V (RecBCD complex), alpha chain (NCBI) variable  
Kanamycin sulfate b2844 putative acyltransferase (VIMSS) -3.5  
Kanamycin sulfate b2908 proline aminopeptidase P II (NCBI) +3.0  
Kanamycin sulfate b2909 orf, hypothetical protein (VIMSS) +1.6  
Kanamycin sulfate b2946 orf, hypothetical protein (VIMSS) +3.0  
Kanamycin sulfate b2952 predicted inner membrane protein (NCBI) -4.9  
Kanamycin sulfate b2964 transport of nucleosides, permease protein (VIMSS) -1.9  
Kanamycin sulfate b3009 conserved inner membrane protein (NCBI) +1.9  
Kanamycin sulfate b3037 conserved outer membrane protein (RefSeq) -4.3  
Kanamycin sulfate b3038 predicted enzyme (NCBI) -5.5  
Kanamycin sulfate b3095 conserved inner membrane protein (NCBI) +1.6  
Kanamycin sulfate b3146 predicted methyltransferase (NCBI) variable  
Kanamycin sulfate b3166 tRNA pseudouridine synthase B (NCBI) +3.0  
Kanamycin sulfate b3190 orf, hypothetical protein (VIMSS) +2.3  
Kanamycin sulfate b3197 D-arabinose 5-phosphate isomerase (NCBI) +1.2  
Kanamycin sulfate b3232 conserved protein with nucleoside triphosphate hydrolase domain (NCBI) +3.3  
Kanamycin sulfate b3244 predicted peptidase (NCBI) variable  
Kanamycin sulfate b3252 conserved inner membrane protein (NCBI) +1.4  
Kanamycin sulfate b3257 conserved inner membrane protein (NCBI) +2.0  
Kanamycin sulfate b3258 sodium/pantothenate symporter (VIMSS) +1.7  
Kanamycin sulfate b3289 16S rRNA m5C967 methyltransferase, S-adenosyl-L-methionine-dependent (NCBI) variable  
Kanamycin sulfate b3347 FKBP-type peptidyl-prolyl cis-trans isomerase (rotamase) (NCBI) variable  
Kanamycin sulfate b3349 FKBP-type peptidyl prolyl cis-trans isomerase (rotamase) (NCBI) variable  
Kanamycin sulfate b3397 ADP-ribose diphosphatase (NCBI) variable  
Kanamycin sulfate b3403 phosphoenolpyruvate carboxykinase (NCBI) -2.9  
Kanamycin sulfate b3416 4-alpha-glucanotransferase (amylomaltase) (NCBI) +1.2  
Kanamycin sulfate b3423 DNA-binding transcriptional repressor (NCBI) variable  
Kanamycin sulfate b3425 thiosulfate sulfurtransferase (NCBI) +1.6  
Kanamycin sulfate b3466 conserved inner membrane protein (NCBI) -5.6  
Kanamycin sulfate b3497 predicted SAM-dependent methyltransferase (NCBI) variable  
Kanamycin sulfate b3498 oligopeptidase A (NCBI) variable  
Kanamycin sulfate b3529 predicted diguanylate cyclase (RefSeq) -2.2  
Kanamycin sulfate b3577 predicted transporter (NCBI) variable  
Kanamycin sulfate b3590 selenocysteinyl-tRNA-specific translation factor (NCBI) +1.3  
Kanamycin sulfate b3591 selenocysteine synthase (NCBI) +1.2  
Kanamycin sulfate b3601 DNA-binding repressor (NCBI) -3.2  
Kanamycin sulfate b3626 UDP-D-glucose:(galactosyl)lipopolysaccharide glucosyltransferase (NCBI) variable  
Kanamycin sulfate b3673 2-module integral membrane pump; multidrug resistance (VIMSS) -1.5  
Kanamycin sulfate b3708 tryptophanase (VIMSS) variable  
Kanamycin sulfate b3752 ribokinase (NCBI) -2.9  
Kanamycin sulfate b3789 glucose-1-phosphate thymidylyltransferase (NCBI) +1.6  
Kanamycin sulfate b3802 predicted protoheme IX synthesis protein (NCBI) +1.4  
Kanamycin sulfate b3803 predicted uroporphyrinogen III methylase (NCBI) +1.9  
Kanamycin sulfate b3807 frataxin-like protein (NCBI) +2.5  
Kanamycin sulfate b3810 hypothetical protein (NCBI) +1.3  
Kanamycin sulfate b3884 putative DEOR-type transcriptional regulator (VIMSS) variable  
Kanamycin sulfate b3891 formate dehydrogenase accessory protein FdhE (NCBI) variable  
Kanamycin sulfate b3894 formate dehydrogenase-O, large subunit (NCBI) +1.4  
Kanamycin sulfate b3931 ATP-dependent protease ATP-binding subunit (NCBI) -4.1  
Kanamycin sulfate b3932 ATP-dependent protease peptidase subunit (NCBI) -4.3  
Kanamycin sulfate b3999 hypothetical protein (NCBI) +2.4  
Kanamycin sulfate b4058 excinuclease ABC subunit A (NCBI) +1.2  
Kanamycin sulfate b4089 transcriptional repressor of rpiB expression (VIMSS) +1.0  
Kanamycin sulfate b4138 C4-dicarboxylate antiporter (NCBI) -1.1  
Kanamycin sulfate b4140 orf, hypothetical protein (VIMSS) -2.8  
Kanamycin sulfate b4170 DNA mismatch repair protein (NCBI) +1.2  
Kanamycin sulfate b4241 trehalose repressor (NCBI) -3.8  
Kanamycin sulfate b4348 specificity determinant for hsdM and hsdR (NCBI) -1.1  
Kanamycin sulfate b4349 DNA methylase M (NCBI) -1.6  
Kanamycin sulfate b4371 16S ribosomal RNA m2G1207 methyltransferase (NCBI) +2.8  
Kanamycin sulfate b4390 probable nadAB transcriptional regulator (VIMSS) variable  
Kanamycin sulfate b4391 fused predicted transporter subunits of ABC superfamily: ATP-binding components (NCBI) +3.1  
Kanamycin sulfate b0216 tRNA-Asp (NCBI) +2.2  
Kanamycin sulfate b1989 tRNA-Asn (NCBI) variable  
Kanamycin sulfate b3424 predicted intramembrane serine protease (NCBI) -2.1  
Kanamycin sulfate b3438 DNA-binding transcriptional repressor (NCBI) variable  
Kanamycin sulfate b3788 dTDP-glucose 4,6-dehydratase (NCBI) +1.3  
Kanamycin sulfate b3996 NADH pyrophosphatase (NCBI) -1.0