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Specific Phenotypes for
Dickeya dianthicola ME23
in plant experiments
Condition
Gene
Description
Fitness
Cons.
cv.Atlantic
DZA65
_RS06315
o-succinylbenzoate--CoA ligase
-1.8
cv.Atlantic
DZA65
_RS12460
nitrate reductase subunit beta
-1.5
cv.Atlantic
DZA65
_RS12490
two-component system response regulator NarL
-1.8
cv.Atlantic
DZA65
_RS22220
oxygen-independent coproporphyrinogen III oxidase
-1.3
cv.Norland
DZA65
_RS00415
ABC transporter ATP-binding protein
variable
cv.Norland
DZA65
_RS00425
sigma-54-dependent Fis family transcriptional regulator
+1.8
cv.Norland
DZA65
_RS00430
histidine kinase
variable
cv.Norland
DZA65
_RS06725
methyl-accepting chemotaxis protein
variable
cv.Norland
DZA65
_RS11600
ribonuclease D
variable
cv.Norland
DZA65
_RS13770
HAMP domain-containing protein
variable
cv.Norland
DZA65
_RS16375
hypothetical protein
variable
cv.Norland
DZA65
_RS18395
hypothetical protein
-2.2
cv.Norland
DZA65
_RS19320
co-chaperone DjlA
-1.4
cv.Norland
DZA65
_RS19530
energy-dependent translational throttle protein EttA
-1.2
cv.Norland
DZA65
_RS21690
chemotaxis protein
+1.2
cv.Norland
DZA65
_RS22205
nitrogen regulation protein NR(II)
-1.4
cv.Norland
DZA65
_RS22220
oxygen-independent coproporphyrinogen III oxidase
-1.4
cv.Upstate
DZA65
_RS00290
formate dehydrogenase accessory sulfurtransferase FdhD
variable
Yes
cv.Upstate
DZA65
_RS00770
bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase
-1.0
cv.Upstate
DZA65
_RS05760
methionine synthase
variable
cv.Upstate
DZA65
_RS06725
methyl-accepting chemotaxis protein
-1.7
cv.Upstate
DZA65
_RS08190
LacI family DNA-binding transcriptional regulator
variable
cv.Upstate
DZA65
_RS11285
hypothetical protein
-1.7
cv.Upstate
DZA65
_RS12490
two-component system response regulator NarL
variable
cv.Upstate
DZA65
_RS12955
peptide ABC transporter substrate-binding protein SapA
variable
cv.Upstate
DZA65
_RS13355
membrane integrity-associated transporter subunit PqiC
variable
cv.Upstate
DZA65
_RS17900
transcriptional repressor MprA
variable
cv.Upstate
DZA65
_RS18155
two-component sensor histidine kinase BarA
variable
cv.Upstate
DZA65
_RS20225
lysine-sensitive aspartokinase 3
-1.7
cv.Upstate
DZA65
_RS20880
4-alpha-glucanotransferase
variable
cv.Upstate
DZA65
_RS20985
hypothetical protein
-1.8
cv.Upstate
DZA65
_RS22220
oxygen-independent coproporphyrinogen III oxidase
-1.9