Specific Phenotypes for Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 in phage experiments

Condition Gene Description Fitness Cons.
6C2_phage GFF499 GGDEF/EAL domain protein YhjH -1.1  
6F2_phage GFF3150 UPF0441 protein ygiB -1.7  
Br60_phage GFF1505 Tryptophan-specific transport protein variable  
Br60_phage GFF3030 Agmatinase (EC 3.5.3.11) -1.4  
Br60_phage GFF4036 tRNA-Ser-CGA +6.1  
Br60_phage GFF4346 Cytochrome O ubiquinol oxidase subunit II (EC 1.10.3.-) variable  
Br60_phage GFF4846 tRNA pseudouridine synthase C (EC 4.2.1.70) variable  
Br60_phage GFF82 hypothetical protein variable  
EIP16_phage GFF1084 Molybdopterin biosynthesis molybdochelatase MogA +1.3  
EIP16_phage GFF3022 D-erythrose-4-phosphate dehydrogenase (EC 1.2.1.72) -1.3  
EIP16_phage GFF4252 Type III restriction-modification system methylation subunit (EC 2.1.1.72) -1.3  
EIP16_phage GFF4489 TonB-dependent receptor; Outer membrane receptor for ferric enterobactin and colicins B, D +5.6  
EIP16_phage GFF494 Protein yhjK -1.7  
EIP16_phage GFF609 Ferrous iron transport protein B -3.2  
ES18h1_phage GFF1899 FIG00638298: membrane protein YfbV variable  
ES18h1_phage GFF3341 DNA-damage-inducible protein I +3.7  
ES18h1_phage GFF4802 FIG01045727: hypothetical protein variable  
ES18h1_phage GFF4827 FIG01047314: hypothetical protein variable  
ES18h1_phage GFF81 Ferric hydroxamate outer membrane receptor FhuA +9.4  
FelixO1_phage GFF1045 Phosphopentomutase (EC 5.4.2.7) +1.5  
FelixO1_phage GFF1408 Chorismate--pyruvate lyase (EC 4.1.3.40) +2.5  
FelixO1_phage GFF1512 FIG002208: Acetyltransferase (EC 2.3.1.-) -1.6  
FelixO1_phage GFF1514 FIG01219785: hypothetical protein +2.7  
FelixO1_phage GFF1518 Phosphoheptose isomerase (EC 5.3.1.-) +1.4  
FelixO1_phage GFF1633 Pyruvate kinase (EC 2.7.1.40) +2.1  
FelixO1_phage GFF1635 Cell wall endopeptidase, family M23/M37 +1.5  
FelixO1_phage GFF1670 Flagellar motor rotation protein MotB +1.4  
FelixO1_phage GFF1683 Tyrosine-specific transport protein -3.0  
FelixO1_phage GFF1702 Transcriptional regulator, GntR family +1.7  
FelixO1_phage GFF1710 Kup system potassium uptake protein +1.7  
FelixO1_phage GFF1742 FIG004212: hypothetical protein +1.7  
FelixO1_phage GFF1978 Nucleoside permease NupC +2.4  
FelixO1_phage GFF2279 Copper sensory histidine kinase CpxA +1.7  
FelixO1_phage GFF2351 tRNA (uracil(54)-C5)-methyltransferase (EC 2.1.1.35) +1.5  
FelixO1_phage GFF2556 NAD-dependent malic enzyme (EC 1.1.1.38) +1.4  
FelixO1_phage GFF2648 tRNA(Cytosine32)-2-thiocytidine synthetase +2.4  
FelixO1_phage GFF2993 FIG00731769: possible membrane protein +1.7  
FelixO1_phage GFF3064 tRNA (guanine46-N7-)-methyltransferase (EC 2.1.1.33) +1.9  
FelixO1_phage GFF3148 ADP-ribose pyrophosphatase (EC 3.6.1.13) +2.3  
FelixO1_phage GFF3404 ABC transporter, periplasmic spermidine putrescine-binding protein PotD (TC 3.A.1.11.1) -1.4  
FelixO1_phage GFF3903 6-phosphogluconate dehydrogenase, decarboxylating (EC 1.1.1.44) +1.8  
FelixO1_phage GFF4193 FIG01200173: hypothetical protein +1.3  
FelixO1_phage GFF4253 Type III restriction-modification system StyLTI enzyme res (EC 3.1.21.5) -1.4  
FelixO1_phage GFF4313 Nucleoside-specific channel-forming protein Tsx precursor +1.2  
FelixO1_phage GFF4338 Putative transport protein +1.4  
FelixO1_phage GFF924 Trehalose operon transcriptional repressor +1.1  
FelixO1_phage (LP_new) GFF1066 Two-component response regulator CreB variable  
FelixO1_phage (LP_new) GFF280 Cytochrome c heme lyase subunit CcmL / Cytochrome c heme lyase subunit CcmH +1.2  
FelixO1_phage (LP_new) GFF3394 putative transcriptional repressor +1.9  
FelixO1_phage (wt new) GFF1084 Molybdopterin biosynthesis molybdochelatase MogA +1.6  
FelixO1_phage (wt new) GFF1505 Tryptophan-specific transport protein +1.3  
FelixO1_phage (wt new) GFF1633 Pyruvate kinase (EC 2.7.1.40) +1.5  
FelixO1_phage (wt new) GFF3022 D-erythrose-4-phosphate dehydrogenase (EC 1.2.1.72) -2.1  
FelixO1_phage (wt new) GFF3236 Dihydroorotate dehydrogenase (EC 1.3.3.1) -2.5  
FelixO1_phage (wt new) GFF3342 Dihydroorotase (EC 3.5.2.3) -2.3  
FelixO1_phage (wt new) GFF367 Orotate phosphoribosyltransferase (EC 2.4.2.10) -1.5  
FelixO1_phage (wt new) GFF3911 Histidinol-phosphate aminotransferase (EC 2.6.1.9) -1.2  
FelixO1_phage (wt new) GFF648 Phosphoglycerate mutase (EC 5.4.2.1) +1.6  
FelixO1_phage (wt new) GFF678 Molybdenum cofactor biosynthesis protein MoaA +1.3  
FelixO1_phage (wt new) GFF725 Molybdopterin biosynthesis protein MoeA +1.2  
P22_phage GFF2820 Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) +1.3  
P22_phage GFF3047 Endonuclease I precursor (EC 3.1.21.1) @ Extracellular deoxyribonuclease Dns (EC 3.1.21.-) +1.5  
P22_phage GFF4395 Acetyl esterase (EC 3.1.1.-) -1.3  
S16_phage GFF3394 putative transcriptional repressor +1.8