| Condition | Gene | Description | Fitness | Cons. |
|---|
| b0020 | DNA-binding transcriptional activator (NCBI) | -5.6 | |
| b0150 | ferrichrome outer membrane transporter (NCBI) | variable | Yes |
| b0411 | nucleoside channel, receptor of phage T6 and colicin K (NCBI) | variable | Yes |
| b0533 | predicted fimbrial-like adhesin protein (RefSeq) | variable | |
| b0568 | bacteriophage N4 receptor, outer membrane subunit (NCBI) | variable | |
| b0569 | bacteriophage N4 receptor, inner membrane subunit (NCBI) | variable | |
| b1786 | orf, hypothetical protein (VIMSS) | variable | |
| b2344 | long-chain fatty acid outer membrane transporter (RefSeq) | variable | |
| b2431 | orf, hypothetical protein (VIMSS) | variable | |
| b3289 | 16S rRNA m5C967 methyltransferase, S-adenosyl-L-methionine-dependent (NCBI) | -1.6 | Yes |
| b3832 | predicted recombination limiting protein (NCBI) | variable | |
| Chi_phage | b0812 | DNA protection during starvation conditions (NCBI) | -1.1 | |
| Chi_phage | b2431 | orf, hypothetical protein (VIMSS) | -1.2 | |
| Kanamycin sulfate | b1451 | predicted iron outer membrane transporter (NCBI) | +3.0 | |
| MOI 10 | b0013 | hypothetical protein (NCBI) | variable | |
| MOI 10 | b0065 | conserved inner membrane protein (NCBI) | variable | |
| MOI 10 | b0150 | ferrichrome outer membrane transporter (NCBI) | variable | Yes |
| MOI 10 | b0196 | predicted outer membrane protein, signal (NCBI) | variable | Yes |
| MOI 10 | b0268 | 2-keto-3-deoxy gluconate (KDG) aldolase; CP4-6 prophage (NCBI) | variable | |
| MOI 10 | b0379 | predicted inner membrane protein (NCBI) | variable | |
| MOI 10 | b0393 | recombination associated protein (NCBI) | variable | Yes |
| MOI 10 | b0568 | bacteriophage N4 receptor, outer membrane subunit (NCBI) | variable | |
| MOI 10 | b0569 | bacteriophage N4 receptor, inner membrane subunit (NCBI) | variable | |
| MOI 10 | b0584 | iron-enterobactin outer membrane transporter (NCBI) | variable | |
| MOI 10 | b0619 | sensory histidine kinase in two-component regulatory system with citB (NCBI) | variable | |
| MOI 10 | b0761 | DNA-binding transcriptional dual regulator (NCBI) | variable | Yes |
| MOI 10 | b0952 | conserved protein (RefSeq) | variable | |
| MOI 10 | b1132 | hypothetical protein (NCBI) | variable | |
| MOI 10 | b1139 | e14 prophage; cell death peptidase, inhibitor of T4 late gene expression (NCBI) | variable | |
| MOI 10 | b1221 | DNA-binding response regulator in two-component regulatory system with NarX (or NarQ) (NCBI) | variable | |
| MOI 10 | b1222 | sensory histidine kinase in two-component regulatory system with NarL (NCBI) | variable | |
| MOI 10 | b1233 | hypothetical protein (NCBI) | variable | |
| MOI 10 | b1256 | outer membrane protein W (NCBI) | variable | |
| MOI 10 | b1395 | 3-hydroxybutyryl-CoA dehydrogenase (NCBI) | variable | |
| MOI 10 | b1496 | fused predicted multidrug transporter subunits of ABC superfamily: membrane component/ATP-binding component (NCBI) | variable | |
| MOI 10 | b1661 | cyclopropane fatty acyl phospholipid synthase (unsaturated-phospholipid methyltransferase) (NCBI) | variable | |
| MOI 10 | b1856 | orf, hypothetical protein (VIMSS) | variable | |
| MOI 10 | b1902 | predicted ferritin-like protein (NCBI) | variable | |
| MOI 10 | b1956 | orf, hypothetical protein (VIMSS) | variable | |
| MOI 10 | b2028 | UDP-glucose 6-dehydrogenase (NCBI) | variable | |
| MOI 10 | b2044 | predicted glycosyl transferase (NCBI) | variable | |
| MOI 10 | b2045 | predicted pyruvyl transferase (NCBI) | variable | |
| MOI 10 | b2046 | colanic acid exporter (NCBI) | variable | |
| MOI 10 | b2052 | bifunctional GDP-fucose synthetase: GDP-4-dehydro-6-deoxy-D-mannose epimerase/ GDP-4-dehydro-6-L-deoxygalactose reductase (NCBI) | variable | |
| MOI 10 | b2053 | GDP-D-mannose dehydratase, NAD(P)-binding (NCBI) | variable | |
| MOI 10 | b2056 | predicted colanic acid polymerase (NCBI) | variable | |
| MOI 10 | b2057 | predicted glycosyl transferase (NCBI) | variable | |
| MOI 10 | b2059 | predicted glycosyl transferase (NCBI) | variable | |
| MOI 10 | b2060 | orf, hypothetical protein (VIMSS) | variable | |
| MOI 10 | b2062 | lipoprotein required for capsular polysaccharide translocation through the outer membrane (NCBI) | variable | |
| MOI 10 | b2156 | lysine transporter (NCBI) | variable | |
| MOI 10 | b2216 | phosphotransfer intermediate protein in two-component regulatory system with RcsBC (NCBI) | variable | |
| MOI 10 | b2218 | hybrid sensory kinase in two-component regulatory system with RcsB and YojN (RefSeq) | variable | |
| MOI 10 | b2261 | O-succinylbenzoate synthase (NCBI) | variable | |
| MOI 10 | b2262 | naphthoate synthase (NCBI) | variable | |
| MOI 10 | b2295 | hypothetical protein (NCBI) | variable | |
| MOI 10 | b2344 | long-chain fatty acid outer membrane transporter (RefSeq) | variable | Yes |
| MOI 10 | b2388 | glucokinase (NCBI) | variable | |
| MOI 10 | b2677 | glycine betaine transporter subunit (NCBI) | variable | Yes |
| MOI 10 | b2678 | glycine betaine transporter subunit (NCBI) | variable | |
| MOI 10 | b2725 | regulator of the transcriptional regulator FhlA (NCBI) | variable | |
| MOI 10 | b2755 | hypothetical protein (NCBI) | variable | |
| MOI 10 | b2796 | predicted serine transporter (NCBI) | variable | Yes |
| MOI 10 | b2797 | L-serine deaminase II (NCBI) | variable | Yes |
| MOI 10 | b2909 | orf, hypothetical protein (VIMSS) | variable | |
| MOI 10 | b2952 | predicted inner membrane protein (NCBI) | variable | |
| MOI 10 | b3149 | DnaA initiator-associating factor for replication initiation (NCBI) | variable | Yes |
| MOI 10 | b3166 | tRNA pseudouridine synthase B (NCBI) | variable | |
| MOI 10 | b3180 | predicted RNA-binding protein (NCBI) | variable | Yes |
| MOI 10 | b3347 | FKBP-type peptidyl-prolyl cis-trans isomerase (rotamase) (NCBI) | variable | |
| MOI 10 | b3408 | ferrous iron transport protein A (NCBI) | variable | Yes |
| MOI 10 | b3409 | ferrous iron transport protein B (NCBI) | variable | Yes |
| MOI 10 | b3416 | 4-alpha-glucanotransferase (amylomaltase) (NCBI) | variable | |
| MOI 10 | b3418 | transcriptional regulator MalT (NCBI) | variable | Yes |
| MOI 10 | b3425 | thiosulfate sulfurtransferase (NCBI) | variable | |
| MOI 10 | b3472 | orf, hypothetical protein (VIMSS) | variable | |
| MOI 10 | b3529 | predicted diguanylate cyclase (RefSeq) | variable | Yes |
| MOI 10 | b3562 | orf, hypothetical protein (VIMSS) | variable | |
| MOI 10 | b3599 | Mannitol phosphotransferase system, IIA/IIB/IIC components (EC 2.7.1.197) (from data) | variable | |
| MOI 10 | b3617 | 2-amino-3-ketobutyrate coenzyme A ligase (NCBI) | variable | |
| MOI 10 | b3625 | lipopolysaccharide core biosynthesis protein (NCBI) | variable | |
| MOI 10 | b3780 | ATP-dependent RNA helicase (NCBI) | variable | |
| MOI 10 | b4001 | hypothetical protein (NCBI) | variable | |
| MOI 10 | b4032 | maltose transporter subunit (NCBI) | variable | Yes |
| MOI 10 | b4033 | maltose transporter subunit (NCBI) | variable | Yes |
| MOI 10 | b4036 | maltoporin precursor (NCBI) | variable | Yes |
| MOI 10 | b4037 | maltose regulon periplasmic protein (NCBI) | variable | |
| MOI 10 | b4049 | tRNA-dihydrouridine synthase A (RefSeq) | variable | |
| MOI 10 | b4173 | predicted GTPase (NCBI) | variable | |
| MOI 10 | b4243 | orf, hypothetical protein (VIMSS) | variable | |
| MOI 10 | b4289 | KpLE2 phage-like element; iron-dicitrate transporter subunit (NCBI) | variable | Yes |
| MOI 10 | b4294 | KpLE2 phage-like element; IS1 repressor protein InsA (NCBI) | variable | |
| MOI 10 | b4314 | major type 1 subunit fimbrin (pilin) (NCBI) | variable | |
| MOI 10 | b4316 | periplasmic chaperone, required for type 1 fimbriae (VIMSS) | variable | |
| MOI 10 | b4317 | outer membrane usher protein, type 1 fimbrial synthesis (NCBI) | variable | |
| MOI 10 | b4319 | minor component of type 1 fimbriae (NCBI) | variable | |
| MOI 10 | b4320 | minor component of type 1 fimbriae (NCBI) | variable | |
| MOI 10 | b4398 | DNA-binding response regulator in two-component regulatory system with CreC (NCBI) | variable | |
| MOI 10 | b4399 | sensory histidine kinase in two-component regulatory system with CreB or PhoB, regulator of the CreBC regulon (NCBI) | variable | |
| MOI 10 | b4400 | inner membrane protein (NCBI) | variable | |
| MOI 10 | b4490 | no description | variable | |
| MOI 10 | b4472 | conserved membrane protein, predicted transporter (NCBI) | variable | Yes |
| MOI 10 | b3417 | maltodextrin phosphorylase (NCBI) | variable | |
| MOI 10 | b1157 | no description | variable | |
| MOI 10 | b4694 | no description | variable | |
| N4 | b0568 | bacteriophage N4 receptor, outer membrane subunit (NCBI) | +2.3 | |
| N4 | b0569 | bacteriophage N4 receptor, inner membrane subunit (NCBI) | +1.8 | |
| N4 | b0707 | hypothetical protein (NCBI) | variable | |
| N4 | b1786 | orf, hypothetical protein (VIMSS) | +1.8 | |
| N4 | b1958 | conserved inner membrane protein (NCBI) | -2.4 | |
| N4 | b2603 | hypothetical protein (NCBI) | -2.3 | |
| N4 | b3529 | predicted diguanylate cyclase (RefSeq) | -1.6 | |
| N4_phage | b0568 | bacteriophage N4 receptor, outer membrane subunit (NCBI) | +9.6 | |
| N4_phage | b0569 | bacteriophage N4 receptor, inner membrane subunit (NCBI) | +9.6 | |
| N4_phage | b1309 | putative polysaccharide hydrolase (VIMSS) | variable | |
| N4_phage | b1381 | hypothetical protein (NCBI) | variable | |
| N4_phage | b1407 | orf, hypothetical protein (VIMSS) | variable | |
| N4_phage | b1786 | orf, hypothetical protein (VIMSS) | +7.5 | |
| N4_phage | b1805 | acyl-CoA synthase (NCBI) | variable | |
| N4_phage | b1968 | predicted sensory kinase in two-component regulatory system with YedW (NCBI) | +1.9 | |
| N4_phage | b2027 | regulator of length of O-antigen component of lipopolysaccharide chains (VIMSS) | variable | |
| N4_phage | b2431 | orf, hypothetical protein (VIMSS) | -1.4 | |
| N4_phage | b3622 | O-antigen ligase (NCBI) | variable | |
| N4_phage | b4346 | component of McrBC 5-methylcytosine restriction system (VIMSS) | variable | |
| N4_phage | b4506 | rpmJ (L36) paralog (NCBI) | variable | |
| N4_phage | b4494 | no description | +2.7 | |
| N4_phage | b4462 | hypothetical protein (RefSeq) | +2.2 | |
| N4_phage | b4588 | hypothetical protein, DLP12 prophage (RefSeq) | variable | |
| P2_phage | b0472 | recombination protein RecR (NCBI) | -1.5 | |
| P2_phage | b4527 | orf, hypothetical protein (VIMSS) | -1.5 | |
| P2_phage | b2431 | orf, hypothetical protein (VIMSS) | -4.2 | |
| P2_phage | b2819 | exonuclease V (RecBCD complex), alpha chain (NCBI) | variable | |
| P2_phage | b3173 | putative alkaline phosphatase I (VIMSS) | variable | |
| P2_phage | b3626 | UDP-D-glucose:(galactosyl)lipopolysaccharide glucosyltransferase (NCBI) | +4.0 | |
| Papa | b0261 | homocysteine methyltransferase (NCBI) | +1.3 | |
| Papa | b0262 | putative ATP-binding component of a transport system (VIMSS) | +1.1 | |
| Papa | b0268 | 2-keto-3-deoxy gluconate (KDG) aldolase; CP4-6 prophage (NCBI) | +1.2 | |
| Papa | b0269 | CP4-6 prophage; predicted dehydratase (NCBI) | +1.9 | |
| Papa | b0531 | pilin chaperone, periplasmic (NCBI) | +1.5 | |
| Papa | b0568 | bacteriophage N4 receptor, outer membrane subunit (NCBI) | +10.6 | |
| Papa | b0569 | bacteriophage N4 receptor, inner membrane subunit (NCBI) | +10.2 | |
| Papa | b0591 | predicted transporter (NCBI) | +1.0 | |
| Papa | b0593 | isochorismate synthase (NCBI) | +1.0 | |
| Papa | b0904 | formate transporter (NCBI) | +1.5 | |
| Papa | b1132 | hypothetical protein (NCBI) | +1.1 | |
| Papa | b1786 | orf, hypothetical protein (VIMSS) | +1.1 | |
| Papa | b1902 | predicted ferritin-like protein (NCBI) | +1.1 | |
| Papa | b2142 | predicted inner membrane protein (NCBI) | +1.1 | |
| Papa | b2661 | succinate-semialdehyde dehydrogenase I, NADP-dependent (NCBI) | +1.4 | |
| Papa | b2662 | 4-aminobutyrate aminotransferase (NCBI) | +1.2 | |
| Papa | b3418 | transcriptional regulator MalT (NCBI) | +1.0 | |
| Papa | b3422 | sigma 54-dependent transcriptional regulator of rtcBA expression (NCBI) | +1.5 | |
| Papa | b3478 | nickel transporter subunit (NCBI) | +1.5 | |
| Papa | b3479 | nickel transporter subunit (NCBI) | +1.5 | |
| Papa | b3480 | nickel transporter subunit (NCBI) | +1.4 | |
| Papa | b3622 | O-antigen ligase (NCBI) | +2.5 | |
| Papa | b4017 | regulator of acetyl CoA synthetase (NCBI) | +1.9 | |
| Papa | b4093 | predicted acyltransferase with acyl-CoA N-acyltransferase domain (NCBI) | +1.2 | |
| Papa | b4094 | ribose 1,5-bisphosphokinase (NCBI) | +1.7 | |
| Papa | b4095 | carbon-phosphorus lyase complex subunit (NCBI) | +1.7 | |
| Papa | b4096 | carbon-phosphorus lyase complex subunit (NCBI) | +1.4 | |
| Papa | b4098 | carbon-phosphorus lyase complex subunit (NCBI) | +1.3 | |
| Papa | b4099 | carbon-phosphorus lyase complex subunit (NCBI) | +1.5 | |
| Papa | b4102 | predicted DNA-binding transcriptional regulator of phosphonate uptake and biodegradation (NCBI) | +1.3 | |
| Papa | b4181 | hypothetical protein (NCBI) | +1.7 | |
| Papa | b4253 | orf, hypothetical protein (VIMSS) | +2.2 | |
| Papa | b4292 | KpLE2 phage-like element; transmembrane signal transducer for ferric citrate transport (NCBI) | +1.0 | |
| Papa | b4346 | component of McrBC 5-methylcytosine restriction system (VIMSS) | +1.5 | |
| Papa | b4367 | ferric iron reductase involved in ferric hydroximate transport (NCBI) | +1.1 | |
| Papa | b4582 | no description | +1.5 | |
| Papa | b4567 | hypothetical protein (NCBI) | +1.5 | |
| Papa | b4370 | tRNA-Leu (NCBI) | +1.8 | |
| Phage | b0150 | ferrichrome outer membrane transporter (NCBI) | variable | Yes |
| Phage | b0567 | hypothetical protein (NCBI) | variable | |
| Phage | b0568 | bacteriophage N4 receptor, outer membrane subunit (NCBI) | variable | |
| Phage | b0569 | bacteriophage N4 receptor, inner membrane subunit (NCBI) | variable | |
| Phage | b0584 | iron-enterobactin outer membrane transporter (NCBI) | variable | |
| Phage | b0586 | enterobactin synthase multienzyme complex component, ATP-dependent (NCBI) | variable | |
| Phage | b0591 | predicted transporter (NCBI) | variable | |
| Phage | b0594 | 2,3-dihydroxybenzoate-AMP ligase component of enterobactin synthase multienzyme complex (NCBI) | variable | |
| Phage | b0595 | isochorismatase (NCBI) | variable | |
| Phage | b0779 | excinuclease ABC subunit B (NCBI) | variable | Yes |
| Phage | b0812 | DNA protection during starvation conditions (NCBI) | variable | |
| Phage | b1451 | predicted iron outer membrane transporter (NCBI) | variable | |
| Phage | b1786 | orf, hypothetical protein (VIMSS) | variable | |
| Phage | b1905 | ferritin iron storage protein (cytoplasmic) (NCBI) | variable | |
| Phage | b2155 | ferric iron-catecholate outer membrane transporter (NCBI) | variable | |
| Phage | b2749 | conserved inner membrane protein (NCBI) | variable | Yes |
| Phage | b2817 | putative amidase (VIMSS) | variable | |
| Phage | b3124 | glycerate kinase I (RefSeq) | variable | |
| Phage | b3173 | putative alkaline phosphatase I (VIMSS) | variable | |
| Phage | b3180 | predicted RNA-binding protein (NCBI) | -1.6 | |
| Phage | b3207 | hypothetical protein (NCBI) | variable | |
| Phage | b3408 | ferrous iron transport protein A (NCBI) | variable | |
| Phage | b3409 | ferrous iron transport protein B (NCBI) | variable | Yes |
| Phage | b3410 | predicted DNA-binding transcriptional regulator (NCBI) | variable | |
| Phage | b3425 | thiosulfate sulfurtransferase (NCBI) | variable | |
| Phage | b3472 | orf, hypothetical protein (VIMSS) | variable | Yes |
| Phage | b3625 | lipopolysaccharide core biosynthesis protein (NCBI) | variable | |
| Phage | b3626 | UDP-D-glucose:(galactosyl)lipopolysaccharide glucosyltransferase (NCBI) | variable | |
| Phage | b3807 | frataxin-like protein (NCBI) | variable | |
| Phage | b3934 | DNA-binding transcriptional dual regulator (NCBI) | variable | |
| Phage | b4046 | putative regulator (VIMSS) | variable | |
| Phage | b4058 | excinuclease ABC subunit A (NCBI) | variable | |
| Phage | b4183 | hypothetical protein (NCBI) | variable | |
| Phage | b4253 | orf, hypothetical protein (VIMSS) | variable | |
| Phage | b4312 | tyrosine recombinase/inversion of on/off regulator of fimA (NCBI) | variable | |
| Phage | b4314 | major type 1 subunit fimbrin (pilin) (NCBI) | variable | |
| Phage | b4316 | periplasmic chaperone, required for type 1 fimbriae (VIMSS) | variable | |
| Phage | b4317 | outer membrane usher protein, type 1 fimbrial synthesis (NCBI) | variable | |
| Phage | b4320 | minor component of type 1 fimbriae (NCBI) | variable | |
| Phage | b4381 | deoxyribose-phosphate aldolase (NCBI) | variable | |
| Phage | b3424 | predicted intramembrane serine protease (NCBI) | variable | |
| Phage need info | b0565 | DLP12 prophage; outer membrane protease VII (outer membrane protein 3b) (NCBI) | -1.1 | |
| Phage need info | b1256 | outer membrane protein W (NCBI) | -3.6 | |
| Phage need info | b2807 | conserved inner membrane protein (NCBI) | +2.0 | |
| Phage need info | b2896 | hypothetical protein (NCBI) | +2.4 | |
| Phage need info | b3096 | hypothetical protein (NCBI) | +2.5 | |
| Phage need info | b3207 | hypothetical protein (NCBI) | +1.5 | |
| Phage need info | b3375 | putative transcriptional regulator (VIMSS) | -2.5 | |
| Phage need info | b3934 | DNA-binding transcriptional dual regulator (NCBI) | -1.6 | |
| Phage need info | b4472 | conserved membrane protein, predicted transporter (NCBI) | +1.3 | |
| Phage_N4 | b0064 | DNA-binding transcriptional dual regulator (NCBI) | +2.9 | |
| Phage_N4 | b0389 | hypothetical protein (NCBI) | variable | |
| Phage_N4 | b0484 | copper transporter (NCBI) | -1.6 | |
| Phage_N4 | b0569 | bacteriophage N4 receptor, inner membrane subunit (NCBI) | variable | |
| Phage_N4 | b1691 | predicted transporter (RefSeq) | variable | |
| Phage_N4 | b1827 | predicted DNA-binding transcriptional regulator (NCBI) | variable | |
| Phage_N4 | b1853 | predicted DNA-binding transcriptional regulator (NCBI) | +2.3 | |
| Phage_N4 | b1900 | fused L-arabinose transporter subunits of ABC superfamily: ATP-binding components (NCBI) | +3.1 | |
| Phage_N4 | b1901 | L-arabinose transporter subunit (NCBI) | +2.8 | |
| Phage_N4 | b2038 | dTDP-4-deoxyrhamnose-3,5-epimerase (NCBI) | -2.0 | |
| Phage_N4 | b2040 | dTDP-4-dehydrorhamnose reductase subunit, NAD(P)-binding, of dTDP-L-rhamnose synthase (NCBI) | -1.9 | |
| Phage_N4 | b2081 | predicted peptidase (NCBI) | -1.2 | |
| Phage_N4 | b2092 | galactitol-specific enzyme IIC component of PTS (NCBI) | +2.5 | |
| Phage_N4 | b2094 | galactitol-specific enzyme IIA component of PTS (NCBI) | +2.4 | |
| Phage_N4 | b2095 | D-tagatose 1,6-bisphosphate aldolase 2, subunit (NCBI) | +2.1 | |
| Phage_N4 | b2156 | lysine transporter (NCBI) | -1.8 | |
| Phage_N4 | b2158 | conserved inner membrane protein (NCBI) | -3.9 | |
| Phage_N4 | b2707 | DNA-bindng transcriptional repressor (NCBI) | variable | |
| Phage_N4 | b2800 | L-fuculose phosphate aldolase (NCBI) | -1.5 | |
| Phage_N4 | b3591 | selenocysteine synthase (NCBI) | -1.1 | |
| Phage_N4 | b3612 | phosphoglyceromutase (NCBI) | -1.8 | |
| Phage_N4 | b3625 | lipopolysaccharide core biosynthesis protein (NCBI) | +1.9 | |
| Phage_N4 | b3884 | putative DEOR-type transcriptional regulator (VIMSS) | +3.4 | |
| Phage_N4 | b3891 | formate dehydrogenase accessory protein FdhE (NCBI) | -1.2 | |
| Phage_N4 | b3895 | formate dehydrogenase accessory protein (NCBI) | -1.1 | |
| Phage_N4 | b4221 | hypothetical protein (NCBI) | -1.3 | |
| Phage_N4 | b4243 | orf, hypothetical protein (VIMSS) | -1.9 | |
| Phage_N4 | b4322 | mannonate dehydratase (NCBI) | -1.3 | |
| Phage_N4 | b4381 | deoxyribose-phosphate aldolase (NCBI) | -1.3 | |
| T7_phage | b0137 | predicted fimbrial-like adhesin protein (NCBI) | variable | |
| T7_phage | b0138 | putative fimbrial-like protein (VIMSS) | variable | |
| T7_phage | b0150 | ferrichrome outer membrane transporter (NCBI) | variable | |
| T7_phage | b0269 | CP4-6 prophage; predicted dehydratase (NCBI) | variable | |
| T7_phage | b0418 | phosphatidylglycerophosphatase A (NCBI) | variable | |
| T7_phage | b0472 | recombination protein RecR (NCBI) | variable | |
| T7_phage | b0530 | putative fimbrial-like protein (VIMSS) | variable | |
| T7_phage | b0531 | pilin chaperone, periplasmic (NCBI) | variable | |
| T7_phage | b0565 | DLP12 prophage; outer membrane protease VII (outer membrane protein 3b) (NCBI) | variable | |
| T7_phage | b0661 | isopentenyl-adenosine A37 tRNA methylthiolase (NCBI) | variable | |
| T7_phage | b1140 | e14 prophage; predicted integrase (NCBI) | variable | |
| T7_phage | b1162 | predicted DNA-binding transcriptional regulator (NCBI) | variable | |
| T7_phage | b4527 | orf, hypothetical protein (VIMSS) | variable | |
| T7_phage | b1498 | putative sulfatase (VIMSS) | variable | |
| T7_phage | b1517 | hypothetical protein (NCBI) | variable | |
| T7_phage | b1629 | electron transport complex protein RnfC (NCBI) | variable | |
| T7_phage | b1632 | NADH-ubiquinone oxidoreductase (NCBI) | variable | |
| T7_phage | b1749 | exonuclease III (NCBI) | variable | |
| T7_phage | b1805 | acyl-CoA synthase (NCBI) | variable | |
| T7_phage | b1856 | orf, hypothetical protein (VIMSS) | variable | |
| T7_phage | b2011 | exonuclease I (NCBI) | variable | |
| T7_phage | b2037 | predicted polisoprenol-linked O-antigen transporter (NCBI) | variable | |
| T7_phage | b2038 | dTDP-4-deoxyrhamnose-3,5-epimerase (NCBI) | -6.6 | |
| T7_phage | b2040 | dTDP-4-dehydrorhamnose reductase subunit, NAD(P)-binding, of dTDP-L-rhamnose synthase (NCBI) | -6.3 | |
| T7_phage | b2214 | predicted thiamine biosynthesis lipoprotein (NCBI) | variable | |
| T7_phage | b2344 | long-chain fatty acid outer membrane transporter (RefSeq) | variable | |
| T7_phage | b2351 | CPS-53 (KpLE1) prophage; bactoprenol glucosyl transferase (NCBI) | variable | |
| T7_phage | b2371 | putative enzyme (VIMSS) | variable | |
| T7_phage | b2393 | nucleoside (except guanosine) transporter (NCBI) | variable | |
| T7_phage | b2431 | orf, hypothetical protein (VIMSS) | variable | |
| T7_phage | b2435 | N-acetylmuramoyl-l-alanine amidase I (NCBI) | variable | |
| T7_phage | b2535 | orf, hypothetical protein (VIMSS) | variable | |
| T7_phage | b2565 | DNA repair protein RecO (NCBI) | variable | |
| T7_phage | b2593 | hypothetical protein (NCBI) | variable | |
| T7_phage | b2742 | predicted outer membrane lipoprotein (NCBI) | variable | |
| T7_phage | b2819 | exonuclease V (RecBCD complex), alpha chain (NCBI) | variable | |
| T7_phage | b2892 | ssDNA exonuclease, 5' --> 3'-specific (NCBI) | variable | |
| T7_phage | b2917 | methylmalonyl-CoA mutase (NCBI) | variable | |
| T7_phage | b3048 | hypothetical protein (NCBI) | variable | |
| T7_phage | b3095 | conserved inner membrane protein (NCBI) | variable | |
| T7_phage | b3150 | hypothetical protein (NCBI) | variable | |
| T7_phage | b3173 | putative alkaline phosphatase I (VIMSS) | +1.1 | |
| T7_phage | b3207 | hypothetical protein (NCBI) | variable | |
| T7_phage | b3232 | conserved protein with nucleoside triphosphate hydrolase domain (NCBI) | variable | |
| T7_phage | b3507 | protein involved in metabolism of C4-dicarboxylates (Katherine Huang) | variable | |
| T7_phage | b3508 | predicted Mg(2+) transport ATPase inner membrane protein (NCBI) | variable | |
| T7_phage | b3509 | orf, hypothetical protein (VIMSS) | variable | |
| T7_phage | b3510 | acid-resistance protein, possible chaperone , subunit of HdeA dimer, inactive form of acid-resistance protein (Katherine Huang) | variable | |
| T7_phage | b3511 | acid-resistance membrane protein (NCBI) | variable | |
| T7_phage | b3625 | lipopolysaccharide core biosynthesis protein (NCBI) | variable | |
| T7_phage | b3626 | UDP-D-glucose:(galactosyl)lipopolysaccharide glucosyltransferase (NCBI) | -3.1 | |
| T7_phage | b3700 | recombination protein F (NCBI) | variable | |
| T7_phage | b3723 | transcriptional antiterminator of the bgl operon (NCBI) | variable | |
| T7_phage | b3785 | putative transport protein (VIMSS) | variable | |
| T7_phage | b3832 | predicted recombination limiting protein (NCBI) | variable | |
| T7_phage | b3928 | hypothetical protein (NCBI) | variable | |
| T7_phage | b3955 | conserved inner membrane protein (NCBI) | variable | |
| T7_phage | b4017 | regulator of acetyl CoA synthetase (NCBI) | variable | |
| T7_phage | b4035 | fused maltose transport subunit, ATP-binding component of ABC superfamily/regulatory protein (NCBI) | -1.9 | |
| T7_phage | b4049 | tRNA-dihydrouridine synthase A (RefSeq) | variable | |
| T7_phage | b4396 | DNA-binding transcriptional activator (NCBI) | variable | |
| T7_phage | b4519 | no description | variable | |
| T7_phage | b2616 | recombination and repair protein (NCBI) | variable | |
| T7_phage | b4472 | conserved membrane protein, predicted transporter (NCBI) | variable | |
| T7_phage | b4696 | no description | variable | |
| T7_phage | b4697 | no description | variable | |
| Utah_phage | b0812 | DNA protection during starvation conditions (NCBI) | -1.1 | |
| Utah_phage | b2431 | orf, hypothetical protein (VIMSS) | -1.3 | |
| double orbital, continuous, 205cpm | b3418 | transcriptional regulator MalT (NCBI) | variable | |
| double orbital, continuous, 205cpm | b3891 | formate dehydrogenase accessory protein FdhE (NCBI) | variable | |
| double orbital, continuous, 205cpm | b3893 | formate dehydrogenase-O, Fe-S subunit (NCBI) | variable | |
| double orbital, continuous, 205cpm | b3895 | formate dehydrogenase accessory protein (NCBI) | variable | |
| double orbital, continuous, 205cpm | b4036 | maltoporin precursor (NCBI) | +1.8 | |
| double orbital, continuous, 205cpm | b4317 | outer membrane usher protein, type 1 fimbrial synthesis (NCBI) | -1.0 | |
| double orbital, continuous, 205cpm | b4320 | minor component of type 1 fimbriae (NCBI) | -1.1 | |
| double orbital, continuous, 205cpm | b4650 | no description | +1.4 | |
| double orbital, continuous, 205cpm | b4697 | no description | variable | |