Specific Phenotypes for Escherichia coli ECOR38 in phage experiments

Condition Gene Description Fitness Cons.
MOI 10 HEPCGN_01110 LexA regulated protein variable  
MOI 10 HEPCGN_01570 molybdenum-dependent transcriptional regulator variable Yes
MOI 10 HEPCGN_01585 molybdate ABC transporter permease subunit variable  
MOI 10 HEPCGN_01625 putative acyl-CoA thioester hydrolase variable Yes
MOI 10 HEPCGN_01665 Putative gluconeogenesis factor variable Yes
MOI 10 HEPCGN_02415 phosphoporin PhoE variable  
MOI 10 HEPCGN_03175 NADP-dependent phosphogluconate dehydrogenase variable  
MOI 10 HEPCGN_04710 zinc ABC transporter substrate-binding protein ZnuA +1.5  
MOI 10 HEPCGN_05765 DNA-binding transcriptional activator PunR variable  
MOI 10 HEPCGN_06060 DUF1471 domain-containing protein +2.0  
MOI 10 HEPCGN_06835 maltose O-acetyltransferase variable  
MOI 10 HEPCGN_06970 muropeptide MFS transporter AmpG -1.2  
MOI 10 HEPCGN_07110 nucleoside-specific channel-forming protein Tsx variable Yes
MOI 10 HEPCGN_07210 recombination-associated protein RdgC variable Yes
MOI 10 HEPCGN_07870 peptidoglycan meso-diaminopimelic acid protein amidase variable  
MOI 10 HEPCGN_08005 Rcs stress response system protein RcsF variable Yes
MOI 10 HEPCGN_08305 polynucleotide adenylyltransferase PcnB variable  
MOI 10 HEPCGN_08505 1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD variable  
MOI 10 HEPCGN_08790 RNA polymerase-associated protein RapA variable  
MOI 10 HEPCGN_09225 phosphopentomutase variable  
MOI 10 HEPCGN_09235 deoxyribose-phosphate aldolase variable  
MOI 10 HEPCGN_09715 serine/threonine protein kinase variable  
MOI 10 HEPCGN_10140 UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-me so-diaminopimelate ligase +1.7  
MOI 10 HEPCGN_10190 Gamma-glutamylcyclotransferase family protein YtfP variable  
MOI 10 HEPCGN_10495 DNA mismatch repair endonuclease MutL variable  
MOI 10 HEPCGN_11130 type V toxin-antitoxin system endoribonuclease antitoxin GhoS variable  
MOI 10 HEPCGN_11985 Uncharacterized protein YjaG variable Yes
MOI 10 HEPCGN_13270 dTDP-glucose 4,6-dehydratase variable  
MOI 10 HEPCGN_13315 guanosine-5'-triphosphate,3'-diphosphate diphosphatase variable  
MOI 10 HEPCGN_13425 Uncharacterized HTH-type transcriptional regulator YieP variable  
MOI 10 HEPCGN_13505 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG variable  
MOI 10 HEPCGN_13920 hexose-6-phosphate:phosphate antiporter variable  
MOI 10 HEPCGN_14945 kdo(2)-lipid A phosphoethanolamine 7''-transferase variable Yes
MOI 10 HEPCGN_15840 transcription elongation factor GreB variable Yes
MOI 10 HEPCGN_15845 two-component system response regulator OmpR variable  
MOI 10 HEPCGN_15850 two-component system sensor histidine kinase EnvZ variable  
MOI 10 HEPCGN_15940 cell division protein DamX -2.0  
MOI 10 HEPCGN_16375 Uncharacterized protein YrdD variable  
MOI 10 HEPCGN_16515 sodium/pantothenate symporter +1.1  
MOI 10 HEPCGN_16585 RNase E specificity factor CsrD variable Yes
MOI 10 HEPCGN_17095 DnaA initiator-associating protein DiaA variable Yes
MOI 10 HEPCGN_18030 lipoprotein metalloprotease SslE variable  
MOI 10 HEPCGN_18035 prepilin peptidase PppA variable  
MOI 10 HEPCGN_18040 Pilotin AspS 2 variable  
MOI 10 HEPCGN_18045 type II secretion system protein GspC variable  
MOI 10 HEPCGN_18050 general secretion pathway protein D variable  
MOI 10 HEPCGN_18055 general secretion pathway protein E variable  
MOI 10 HEPCGN_18060 general secretion pathway protein F variable  
MOI 10 HEPCGN_18065 general secretion pathway protein G variable  
MOI 10 HEPCGN_18070 general secretion pathway protein H variable  
MOI 10 HEPCGN_18075 general secretion pathway protein I variable  
MOI 10 HEPCGN_18085 general secretion pathway protein K variable  
MOI 10 HEPCGN_18090 general secretion pathway protein L variable  
MOI 10 HEPCGN_18095 GspM family type II secretion system protein YghD variable  
MOI 10 HEPCGN_19340 murein transglycosylase A variable  
MOI 10 HEPCGN_19430 L-serine ammonia-lyase II +1.1 Yes
MOI 10 HEPCGN_19705 DNA mismatch repair protein MutS variable  
MOI 10 HEPCGN_19890 lytic murein transglycosylase B -1.8  
MOI 10 HEPCGN_20375 23S rRNA pseudouridine(1911/1915/1917) synthase RluD variable  
MOI 10 HEPCGN_20380 purine nucleoside phosphorylase YfiH +1.2  
MOI 10 HEPCGN_20540 SoxR-reducing system protein RseC variable  
MOI 10 HEPCGN_20610 membrane-bound lytic murein transglycosylase MltF -1.3  
MOI 10 HEPCGN_21080 glycine cleavage system transcriptional repressor variable  
MOI 10 HEPCGN_22190 lipid IV(A) 4-amino-4-deoxy-L-arabinosyltransferase -1.4  
MOI 10 HEPCGN_22305 anaerobic glycerol-3-phosphate dehydrogenase subunit A variable  
MOI 10 HEPCGN_22610 nucleoid-associated protein YejK variable Yes
MOI 10 HEPCGN_22900 ATP-dependent Clp protease ATP-binding subunit ClpA variable  
MOI 10 HEPCGN_23245 ABC transporter ATP-binding protein variable  
MOI 10 HEPCGN_24000 TetR family copper-responsive transcriptional repressor ComR variable  
MOI 10 HEPCGN_24075 spermidine/putrescine ABC transporter ATP-binding protein PotA variable  
Phage HEPCGN_03815 head-tail connector protein -2.4  
Phage HEPCGN_05755 cyclopropane fatty acyl phospholipid synthase variable  
Phage HEPCGN_05870 anhydro-N-acetylmuramic acid kinase variable  
Phage HEPCGN_07600 transcriptional regulator BetI variable  
Phage HEPCGN_07935 endonuclease/exonuclease/phosphatase family protein variable Yes
Phage HEPCGN_12005 sigma D regulator +1.3  
Phage HEPCGN_12495 envelope stress sensor histidine kinase CpxA variable  
Phage HEPCGN_13440 ribokinase +1.7 Yes
Phage HEPCGN_16615 AsmA2 domain-containing protein YhdP variable Yes
Phage HEPCGN_19490 two-component sensor histidine kinase BarA +1.7 Yes
Phage HEPCGN_19670 murein hydrolase activator NlpD +2.4  
Phage HEPCGN_20735 stationary phase inducible protein CsiE +1.4