| Condition | Gene | Description | Fitness | Cons. |
|---|
| D-Glucose | PP_0145 | Na+/Pi-cotransporter | variable | |
| D-Glucose | PP_0506 | putative ABC efflux transporter, permease protein | variable | |
| D-Glucose | PP_0592 | Oxidoreductase, short chain dehydrogenase/reductase family | variable | |
| D-Glucose | PP_0612 | FAD-dependent glycine/D-amino acid oxidase | variable | |
| D-Glucose | PP_0901 | DNA-binding response regulator | variable | |
| D-Glucose | PP_0902 | integral membrane sensor signal transduction histidine kinase | variable | |
| D-Glucose | PP_0998 | conserved protein of unknown function | variable | |
| D-Glucose | PP_1013 | Sensor histidine kinase | variable | |
| D-Glucose | PP_1015 | mannose/glucose ABC transporter, glucose-binding periplasmic protein | variable | |
| D-Glucose | PP_1016 | mannose/glucose ABC transporter, permease protein | variable | |
| D-Glucose | PP_1017 | mannose/glucose ABC transporter, permease protein | -3.8 | |
| D-Glucose | PP_1018 | mannose/glucose ABC transporter - ATP binding subunit | -3.5 | |
| D-Glucose | PP_1019 | carbohydrate-selective porin | variable | |
| D-Glucose | PP_1063 | DNA-binding transcriptional regulator, homocysteine-binding | variable | |
| D-Glucose | PP_1444 | quinoprotein glucose dehydrogenase | variable | |
| D-Glucose | PP_1445 | carbohydrate-selective porin | +1.7 | |
| D-Glucose | PP_1752 | conserved protein of unknown function | variable | |
| D-Glucose | PP_2660 | conserved protein of unknown function | variable | |
| D-Glucose | PP_3065 | Pyocin R2_PP, tail formation | variable | |
| D-Glucose | PP_3786 | aminotransferase | variable | |
| D-Glucose | PP_3801 | putative Cation ABC transporter, periplasmic cation-binding protein | variable | |
| D-Glucose | PP_4100 | Transcriptional regulator, Cro/CI family | variable | |
| D-Glucose | PP_4776 | AsnC family transcriptional regulator | variable | |
| D-Glucose | PP_4779 | AMP nucleosidase | variable | |
| D-Glucose | PP_5182 | polyamine:pyruvate transaminase | variable | |
| D-Glucose | PP_5320 | two-component system DNA-binding transcriptional dual response regulator PhoB | variable | Yes |
| Trisodium citrate dihydrate | PP_0147 | Citrate transporter | -2.1 | Yes |
| Trisodium citrate dihydrate | PP_1416 | putative Tricarboxylate transport protein TctA | -2.5 | |
| Trisodium citrate dihydrate | PP_1418 | putative Tricarboxylate transport protein TctC | -5.3 | Yes |
| Trisodium citrate dihydrate | PP_1419 | tricarboxylate-specific outer membrane porin | -2.1 | Yes |
| Trisodium citrate dihydrate | PP_1420 | Transcriptional regulatory protein tctD | -5.9 | Yes |
| Trisodium citrate dihydrate | PP_1421 | putative Sensor histidine kinase TctE | -5.7 | Yes |
| Trisodium citrate dihydrate | PP_1430 | putative periplasmic serine endoprotease DegP-like | variable | |
| Trisodium citrate dihydrate | PP_1689 | putative Long-chain fatty acid transporter | variable | |
| Trisodium citrate dihydrate | PP_2082 | phosphoenolpyruvate synthetase | -1.1 | |
| Trisodium citrate dihydrate | PP_2800 | putative Diaminobutyrate-2-oxoglutarate transaminase | variable | |
| Valerolactone | PP_1400 | Alpha-ketoglutarate permease | -1.3 | |
| Valerolactone | PP_1402 | C4-dicarboxylate transport sensor protein | -1.5 | |
| Valerolactone | PP_1430 | putative periplasmic serine endoprotease DegP-like | -1.9 | |
| Valerolactone | PP_1761 | diguanylate cyclase with phosphodiesterase domain | +1.5 | |
| Valerolactone | PP_2910 | L-2-hydroxyglutarate oxidase | -2.2 | |
| Valerolactone | PP_4172 | conserved exported protein of unknown function | +1.6 | |
| Valerolactone | PP_4173 | Sensor histidine kinase/response regulator | +2.0 | |
| Valerolactone | PP_4629 | Sensory box protein | +1.7 | |