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Specific Phenotypes for
Escherichia fergusonii Becca
in no phage control experiments
Condition
Gene
Description
Fitness
Cons.
EFB2
_00181
Lipopolysaccharide core heptosyltransferase RfaQ
-2.2
EFB2
_00188
Undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase
-1.8
EFB2
_00189
O-antigen ligase
-2.4
EFB2
_00270
Cellulose biosynthesis protein BcsG
variable
EFB2
_00271
hypothetical protein
variable
EFB2
_00272
Cyclic di-GMP binding protein BcsE
+1.7
EFB2
_00273
Protein YhjR
variable
EFB2
_00274
Cellulose biosynthesis protein BcsQ
+2.3
EFB2
_00275
Cellulose synthase catalytic subunit [UDP-forming]
variable
EFB2
_00276
Cyclic di-GMP-binding protein
variable
EFB2
_00278
Cellulose synthase operon protein C
variable
EFB2
_00315
Glutathione reductase
-1.3
EFB2
_00440
Cell division protein DamX
variable
EFB2
_00616
putative protein YrbL
-1.9
EFB2
_00618
RNase adapter protein RapZ
-2.6
EFB2
_00628
Intermembrane phospholipid transport system ATP-binding protein MlaF
-1.4
EFB2
_00629
Intermembrane phospholipid transport system permease protein MlaE
variable
EFB2
_00630
Intermembrane phospholipid transport system binding protein MlaD
variable
EFB2
_00631
Intermembrane phospholipid transport system binding protein MlaC
variable
EFB2
_00650
Putative transferase YhbX
variable
EFB2
_00660
Lipoprotein NlpI
-1.8
EFB2
_00674
DnaA initiator-associating protein DiaA
-1.9
EFB2
_00690
Glucitol operon repressor
-1.9
EFB2
_00716
Modulator protein MzrA
variable
EFB2
_00787
Sensor protein QseC
-1.9
EFB2
_00801
Inner membrane protein YghB
variable
EFB2
_00810
Hydrogenase-2 small chain
variable
EFB2
_00811
Formate dehydrogenase, nitrate-inducible, iron-sulfur subunit
variable
EFB2
_00812
putative Ni/Fe-hydrogenase 2 b-type cytochrome subunit
+1.2
EFB2
_00813
Hydrogenase-2 large chain
+1.1
EFB2
_00814
Hydrogenase 2 maturation protease
+1.1
EFB2
_00862
hypothetical protein
-1.3
EFB2
_00987
HTH-type transcriptional regulator ArgP
variable
EFB2
_01046
HTH-type transcriptional regulator GalR
variable
EFB2
_01131
Signal transduction histidine-protein kinase BarA
+1.1
EFB2
_01193
Carbamoyl dehydratase HypE
variable
EFB2
_01202
Formate hydrogenlyase subunit 5
-1.7
EFB2
_01454
Sulfate transport system permease protein CysW
-1.2
EFB2
_01514
Intermembrane phospholipid transport system lipoprotein MlaA
variable
EFB2
_01529
Chorismate synthase
-2.2
EFB2
_01569
HTH-type transcriptional regulator HdfR
variable
EFB2
_01638
Transcriptional regulatory protein RcsB
+1.7
EFB2
_01700
Lysine-specific permease
variable
EFB2
_02208
putative diguanylate cyclase DgcJ
+5.8
EFB2
_02360
Ion-translocating oxidoreductase complex subunit E
-1.9
EFB2
_02362
Ion-translocating oxidoreductase complex subunit D
-1.5
EFB2
_02604
Transcriptional regulatory protein TyrR
variable
EFB2
_02638
Exoribonuclease 2
-1.5
EFB2
_02722
hypothetical protein
-2.5
EFB2
_02845
Transcriptional regulatory protein PhoP
variable
EFB2
_02846
Sensor protein PhoQ
variable
EFB2
_02848
Peptidase T
-1.2
EFB2
_02874
PTS system glucose-specific EIICB component
variable
EFB2
_02908
[Ribosomal protein S5]-alanine N-acetyltransferase
+1.2
EFB2
_02924
Glucans biosynthesis glucosyltransferase H
-2.1
EFB2
_02925
Glucans biosynthesis protein G
-2.4
EFB2
_03156
3-phosphoshikimate 1-carboxyvinyltransferase
-2.2
EFB2
_03179
ATP-dependent Clp protease ATP-binding subunit ClpA
variable
EFB2
_03286
putative L,D-transpeptidase YbiS
-1.6
EFB2
_03347
UDP-glucose 4-epimerase
+5.5
EFB2
_03409
putative protein YbfE
-1.6
EFB2
_03525
hypothetical protein
+1.7
EFB2
_03526
Bacteriophage adsorption protein A
variable
EFB2
_03527
hypothetical protein
variable
EFB2
_03621
Trigger factor
-2.6
EFB2
_03682
Inhibitor of hydrogen peroxide resistance
-1.8
EFB2
_03781
hypothetical protein
-2.6
EFB2
_03829
Ribonuclease HI
variable
EFB2
_03901
Poly(A) polymerase I
-1.9
EFB2
_04120
Pyruvate dehydrogenase complex repressor
variable
EFB2
_04379
Fumarate reductase flavoprotein subunit
-1.5
EFB2
_04380
Fumarate reductase iron-sulfur subunit
-1.9
EFB2
_04466
HTH-type transcriptional regulator GadX
+1.7
EFB2
_04775
Transcription antitermination protein RfaH
variable
EFB2
_04777
Sec-independent protein translocase protein TatC
-2.4
EFB2
_04829
hypothetical protein
-1.4
EFB2
_04847
Lipid III flippase
-1.5
EFB2
_04853
UDP-N-acetylglucosamine 2-epimerase
variable
EFB2
_04871
HTH-type transcriptional regulator HdfR
-3.2
EFB2
_04891
Protein MioC
-1.5