| Condition | Gene | Description | Fitness | Cons. |
|---|
| diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=Mono | BACOVA_00086 | hypothetical protein | -1.2 | |
| diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=Mono | BACOVA_00408 | hypothetical protein | -1.2 | |
| diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=Mono | BACOVA_02824 | DNA mismatch repair protein MutS | +1.2 | Yes |
| diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=Mono | BACOVA_03968 | bacterial cytochrome ubiquinol oxidase | variable | Yes |
| diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=Mono | BACOVA_04148 | SusD family protein | -1.8 | Yes |
| diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=Mono | BACOVA_04149 | TonB-linked outer membrane protein, SusC/RagA family | -1.6 | Yes |
| diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=Mono | BACOVA_04151 | RNA polymerase sigma-70 factor | -2.0 | |
| diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=Mono | BACOVA_05415 | hypothetical protein | -1.4 | |
| diet=StandardDiet; sample=FecalPellet; inoculation=Mono | BACOVA_00186 | hypothetical protein | -4.1 | |
| diet=StandardDiet; sample=FecalPellet; inoculation=Mono | BACOVA_00187 | polysaccharide biosynthesis protein | variable | |
| diet=StandardDiet; sample=FecalPellet; inoculation=Mono | BACOVA_00190 | oxidoreductase, short chain dehydrogenase/reductase family protein | variable | |
| diet=StandardDiet; sample=FecalPellet; inoculation=Mono | BACOVA_00194 | chain length determinant protein | variable | |
| diet=StandardDiet; sample=FecalPellet; inoculation=Mono | BACOVA_00195 | polysaccharide biosynthesis/export protein | -3.7 | |
| diet=StandardDiet; sample=FecalPellet; inoculation=Mono | BACOVA_00566 | 4Fe-4S binding domain protein | variable | |
| diet=StandardDiet; sample=FecalPellet; inoculation=Mono | BACOVA_00567 | hypothetical protein | -4.4 | |
| diet=StandardDiet; sample=FecalPellet; inoculation=Mono | BACOVA_00570 | glycosyltransferase, group 1 family protein | variable | |
| diet=StandardDiet; sample=FecalPellet; inoculation=Mono | BACOVA_00671 | NOL1/NOP2/sun family protein | variable | |
| diet=StandardDiet; sample=FecalPellet; inoculation=Mono | BACOVA_00675 | heavy metal efflux pump, CzcA family | variable | |
| diet=StandardDiet; sample=FecalPellet; inoculation=Mono | BACOVA_00720 | ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein | -2.0 | |
| diet=StandardDiet; sample=FecalPellet; inoculation=Mono | BACOVA_01280 | hypothetical protein | -1.9 | |
| diet=StandardDiet; sample=FecalPellet; inoculation=Mono | BACOVA_01575 | hypothetical protein | -2.6 | |
| diet=StandardDiet; sample=FecalPellet; inoculation=Mono | BACOVA_01576 | hypothetical protein | variable | |
| diet=StandardDiet; sample=FecalPellet; inoculation=Mono | BACOVA_02259 | hypothetical protein | variable | |
| diet=StandardDiet; sample=FecalPellet; inoculation=Mono | BACOVA_02443 | formate--tetrahydrofolate ligase | -1.3 | |
| diet=StandardDiet; sample=FecalPellet; inoculation=Mono | BACOVA_02566 | DEAD/DEAH box helicase | variable | |
| diet=StandardDiet; sample=FecalPellet; inoculation=Mono | BACOVA_02643 | peptidase, S41 family | -1.4 | |
| diet=StandardDiet; sample=FecalPellet; inoculation=Mono | BACOVA_03369 | hypothetical protein | -1.4 | |
| diet=StandardDiet; sample=FecalPellet; inoculation=Mono | BACOVA_03731 | polysaccharide biosynthesis/export protein | variable | |
| diet=StandardDiet; sample=FecalPellet; inoculation=Mono | BACOVA_03822 | hypothetical protein | -1.7 | |
| diet=StandardDiet; sample=FecalPellet; inoculation=Mono | BACOVA_03823 | TonB-dependent receptor | -1.2 | |
| diet=StandardDiet; sample=FecalPellet; inoculation=Mono | BACOVA_04128 | glycosyl hydrolase, family 88 | -2.2 | |
| diet=StandardDiet; sample=FecalPellet; inoculation=Mono | BACOVA_04201 | ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein | -1.7 | |
| diet=StandardDiet; sample=FecalPellet; inoculation=Mono | BACOVA_04208 | hypothetical protein | variable | |
| diet=StandardDiet; sample=FecalPellet; inoculation=Mono | BACOVA_04342 | MATE efflux family protein | -1.3 | |
| diet=StandardDiet; sample=FecalPellet; inoculation=Mono | BACOVA_04356 | transporter, small conductance mechanosensitive ion channel MscS family protein | variable | |
| diet=StandardDiet; sample=FecalPellet; inoculation=Mono | BACOVA_04853 | proton-translocating NADH-quinone oxidoreductase, chain N | variable | |
| diet=StandardDiet; sample=FecalPellet; inoculation=Mono | BACOVA_04855 | proton-translocating NADH-quinone oxidoreductase, chain L | variable | |
| diet=StandardDiet; sample=FecalPellet; inoculation=Mono | BACOVA_04860 | respiratory-chain NADH dehydrogenase, 49 Kd subunit | -2.1 | |
| diet=StandardDiet; sample=FecalPellet; inoculation=Mono | BACOVA_04862 | NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 | variable | |
| diet=StandardDiet; sample=FecalPellet; inoculation=Mono | BACOVA_04944 | aminotransferase, class I/II | -1.4 | |
| diet=StandardDiet; sample=FecalPellet; inoculation=Mono | BACOVA_05069 | PhoH family protein | variable | |
| diet=StandardDiet; sample=FecalPellet; inoculation=Mono | BACOVA_05097 | large conductance mechanosensitive channel protein | -1.5 | |
| diet=StandardDiet; sample=FecalPellet; inoculation=Mono | BACOVA_05211 | transporter, major facilitator family protein | -1.9 | |
| diet=StandardDiet; sample=FecalPellet; inoculation=Mono | BACOVA_05263 | putative iron-sulfur cluster-binding protein | +1.4 | |
| diet=StandardDiet; sample=FecalPellet; inoculation=Mono | BACOVA_05370 | phosphopyruvate hydratase | -1.6 | |
| diet=StandardDiet; sample=FecalPellet; inoculation=Mono | BACOVA_05377 | peptidase T | -2.0 | |
| diet=StandardDiet; sample=FecalPellet; inoculation=Mono | BACOVA_05567 | LysR substrate binding domain protein | -2.2 | |