Specific Phenotypes for Pseudomonas simiae WCS417 in motility_chemotaxis experiments

Condition Gene Description Fitness Cons.
PS417_05075 serine dehydratase variable  
PS417_05575 Glycerol kinase (EC 2.7.1.30) (from data) variable  
PS417_05580 glycerol uptake facilitator GlpF variable  
PS417_00595 chemotaxis protein variable  
PS417_06350 stationary phase survival protein SurE variable  
PS417_06615 ABC transporter for branched-chain amino acids, substrate-binding component (from data) variable  
PS417_08105 N-ethylammeline chlorohydrolase -1.9  
PS417_08180 glycosyl transferase variable  
PS417_10965 chemotaxis protein variable  
PS417_12895 pyruvate dehydrogenase variable  
PS417_13180 AraC family transcriptional regulator variable  
PS417_13835 3-hydroxyisobutyryl-CoA hydrolase (EC 3.1.2.4) (from data) variable  
PS417_14725 Nitrite reductase (NAD(P)H) (EC 1.7.1.4) (from data) variable  
PS417_14730 Nitrite reductase (NAD(P)H) (EC 1.7.1.4) (from data) variable  
PS417_01705 Formiminoglutamic iminohydrolase (EC 3.5.3.13) (from data) variable  
PS417_01720 Urocanate hydratase (EC 4.2.1.49) (from data) variable  
PS417_18840 chemotaxis protein variable  
PS417_18860 transcriptional regulator variable  
PS417_20840 hypothetical protein variable  
PS417_20960 Nitrate-binding regulatory protein (nasS) (from data) variable  
PS417_21580 chemotaxis protein CheW variable  
PS417_21600 pilus assembly protein PilZ variable  
PS417_21725 amino acid transporter variable  
PS417_22190 diguanylate cyclase variable  
PS417_22360 Glycine dehydrogenase (aminomethyl-transferring) (EC 1.4.4.2) (from data) variable  
PS417_22500 porin variable  
PS417_22550 ATP-binding protein variable  
PS417_22555 chemotaxis protein variable  
PS417_22695 glyceraldehyde-3-phosphate dehydrogenase variable  
PS417_23650 Kynureninase (EC 3.7.1.3) (from data) variable  
PS417_23655 AsnC family transcriptional regulator variable  
PS417_23685 anthranilate 1,2-dioxygenase (deaminating, decarboxylating) large subunit [EC: 1.14.12.1] (from data) variable  
PS417_23690 Anthranilate 1,2-dioxygenase (deaminating, decarboxylating) (EC 1.14.12.1) (from data) variable  
PS417_23695 electron transfer component of the anthranilate 1,2-dioxygenase system (EC 1.14.12.1) (from data) variable  
PS417_23700 aromatic amino acid transporter variable  
PS417_02520 chemotaxis protein variable  
PS417_25910 amine oxidase variable  
PS417_25970 diguanylate cyclase variable  
PS417_25975 Acyl-CoA dehydrogenase (EC 1.3.8.7) (from data) variable  
PS417_26205 threonine aldolase variable  
PS417_02655 amino acid ABC transporter substrate-binding protein variable  
PS417_02660 branched-chain amino acid transporter permease subunit LivH variable  
PS417_02665 branched-chain amino acid ABC transporter permease variable  
PS417_26875 histidine kinase variable  
PS417_27615 ammonia channel protein variable  
PS417_27650 chemotaxis protein variable  
PS417_27710 AsnC family transcriptional regulator variable  
PS417_28250 cell wall assembly protein variable  
PS417_28425 lysine transporter LysE variable  
PS417_03230 TetR family transcriptional regulator variable  
PS417_03670 MerR family transcriptional regulator variable  
PS417_00405 DNA polymerase I -1.7  
PS417_04295 peptidase PmbA variable  
PS417_04425 histidinol-phosphate aminotransferase variable  
PS417_04735 LysR family transcriptional regulator variable  
PS417_04900 amino acid ABC transporter substrate-binding protein variable  
PS417_04910 amino acid ABC transporter permease variable  
Method=Plug_approach; Chemical=L-Alanine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 PS417_05575 Glycerol kinase (EC 2.7.1.30) (from data) -4.7  
Method=Plug_approach; Chemical=L-Alanine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 PS417_05580 glycerol uptake facilitator GlpF -3.4  
Method=Plug_approach; Chemical=L-Alanine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 PS417_08105 N-ethylammeline chlorohydrolase -1.4  
Method=Plug_approach; Chemical=L-Alanine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 PS417_08415 hypothetical protein -1.8  
Method=Plug_approach; Chemical=L-Alanine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 PS417_17170 carbon-nitrogen hydrolase +1.1  
Method=Plug_approach; Chemical=L-Alanine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 PS417_17510 histidine kinase -1.1  
Method=Plug_approach; Chemical=L-Alanine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 PS417_21095 membrane protein -2.2  
Method=Plug_approach; Chemical=L-Alanine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 PS417_21100 alpha-L-glutamate ligase -2.7  
Method=Plug_approach; Chemical=L-Alanine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 PS417_22190 diguanylate cyclase -1.5  
Method=Plug_approach; Chemical=L-Alanine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 PS417_22500 porin -1.6  
Method=Plug_approach; Chemical=L-Alanine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 PS417_22555 chemotaxis protein -2.3  
Method=Plug_approach; Chemical=L-Alanine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 PS417_22845 membrane protein -5.5  
Method=Plug_approach; Chemical=L-Alanine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 PS417_00245 oligopeptidase A -1.1  
Method=Plug_approach; Chemical=L-Alanine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 PS417_24680 murein transglycosylase +1.3  
Method=Plug_approach; Chemical=L-Alanine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 PS417_25700 cyclic AMP receptor protein +1.8  
Method=Plug_approach; Chemical=L-Alanine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 PS417_25860 glycerol-3-phosphate acyltransferase -1.9  
Method=Plug_approach; Chemical=L-Alanine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 PS417_02665 branched-chain amino acid ABC transporter permease -1.0  
Method=Plug_approach; Chemical=L-Alanine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 PS417_27185 porin -2.4  
Method=Plug_approach; Chemical=L-Alanine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 PS417_27615 ammonia channel protein -1.6  
Method=Plug_approach; Chemical=L-Alanine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 PS417_27710 AsnC family transcriptional regulator -3.7  
Method=Plug_approach; Chemical=L-Alanine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 PS417_27810 ribonuclease PH -1.5  
Method=Plug_approach; Chemical=L-Alanine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 PS417_03670 MerR family transcriptional regulator -2.5  
Method=Plug_approach; Chemical=L-Alanine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 PS417_04675 deoxyribonuclease +1.5  
Method=Plug_approach; Chemical=L-Alanine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 PS417_04900 amino acid ABC transporter substrate-binding protein -2.1  
Method=Plug_approach; Chemical=L-Alanine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 PS417_04910 amino acid ABC transporter permease -2.7  
Method=Plug_approach; Chemical=L-Arginine; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50 PS417_22325 amino acid APC transporter +1.1  
Method=Plug_approach; Chemical=L-Arginine; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50 PS417_27615 ammonia channel protein -1.2  
Method=Plug_approach; Chemical=L-Glutamic acid monopotassium salt monohydrate; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50 PS417_22325 amino acid APC transporter +1.1  
Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 PS417_05575 Glycerol kinase (EC 2.7.1.30) (from data) -3.2  
Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 PS417_05580 glycerol uptake facilitator GlpF -1.8  
Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 PS417_08105 N-ethylammeline chlorohydrolase -2.1  
Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 PS417_08430 phospho-2-dehydro-3-deoxyheptonate aldolase -2.3  
Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 PS417_10965 chemotaxis protein -4.9  
Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 PS417_14730 Nitrite reductase (NAD(P)H) (EC 1.7.1.4) (from data) -2.7  
Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 PS417_16415 tRNA 2-thiocytidine biosynthesis protein TtcA -1.7  
Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 PS417_21095 membrane protein -2.7  
Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 PS417_21100 alpha-L-glutamate ligase -3.3  
Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 PS417_22190 diguanylate cyclase -2.7  
Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 PS417_22325 amino acid APC transporter +1.1  
Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 PS417_22410 hypothetical protein -4.8  
Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 PS417_22500 porin -2.4  
Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 PS417_22555 chemotaxis protein -2.5  
Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 PS417_22845 membrane protein -6.3  
Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 PS417_00245 oligopeptidase A -1.0  
Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 PS417_24680 murein transglycosylase +1.6  
Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 PS417_25970 diguanylate cyclase +1.5  
Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 PS417_02655 amino acid ABC transporter substrate-binding protein -3.9  
Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 PS417_02660 branched-chain amino acid transporter permease subunit LivH -3.1  
Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 PS417_02665 branched-chain amino acid ABC transporter permease -2.9  
Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 PS417_27185 porin -1.9  
Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 PS417_27810 ribonuclease PH -1.7  
Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 PS417_03670 MerR family transcriptional regulator -2.0  
Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 PS417_04285 protease TldD -1.3  
Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 PS417_04725 chemotaxis protein CheW -1.4  
Method=Plug_approach; Chemical=casamino acids; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50 PS417_22325 amino acid APC transporter +1.3  
Method=Plug_approach; Chemical=casamino acids; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50 PS417_22845 membrane protein -2.7