Specific Phenotypes for Pseudomonas sp. RS175 in mixed carbon source experiments

Condition Gene Description Fitness Cons.
Trisodium citrate dihydrate PFR28_00017 Dapdiamide A synthase variable  
Trisodium citrate dihydrate PFR28_00018 Na(+), Li(+), K(+)/H(+) antiporter variable  
Trisodium citrate dihydrate PFR28_00223 Maleylpyruvate isomerase variable Yes
Trisodium citrate dihydrate PFR28_00312 hypothetical protein variable  
Trisodium citrate dihydrate PFR28_00318 tRNA U34 carboxymethyltransferase variable  
Trisodium citrate dihydrate PFR28_00393 LL-diaminopimelate aminotransferase variable  
Trisodium citrate dihydrate PFR28_00538 hypothetical protein variable Yes
Trisodium citrate dihydrate PFR28_00539 High-affinity branched-chain amino acid transport system permease protein LivH variable Yes
Trisodium citrate dihydrate PFR28_00679 hypothetical protein variable Yes
Trisodium citrate dihydrate PFR28_00680 hypothetical protein variable Yes
Trisodium citrate dihydrate PFR28_00737 hypothetical protein -2.3  
Trisodium citrate dihydrate PFR28_00962 Phospho-2-dehydro-3-deoxyheptonate aldolase, Tyr-sensitive -1.5  
Trisodium citrate dihydrate PFR28_01088 Cbb3-type cytochrome c oxidase subunit CcoP2 -1.1  
Trisodium citrate dihydrate PFR28_01407 Phospho-2-dehydro-3-deoxyheptonate aldolase, Tyr-sensitive -1.5 Yes
Trisodium citrate dihydrate PFR28_01527 Carboxynorspermidine/carboxyspermidine decarboxylase -1.8  
Trisodium citrate dihydrate PFR28_01528 Carboxynorspermidine synthase variable  
Trisodium citrate dihydrate PFR28_02108 Release factor glutamine methyltransferase variable  
Trisodium citrate dihydrate PFR28_02361 hypothetical protein variable  
Trisodium citrate dihydrate PFR28_02453 Protease PrtS -1.3  
Trisodium citrate dihydrate PFR28_02460 Sensor protein RstB variable  
Trisodium citrate dihydrate PFR28_02475 4-hydroxyphenylpyruvate dioxygenase variable Yes
Trisodium citrate dihydrate PFR28_02610 Leucyl/phenylalanyl-tRNA--protein transferase variable  
Trisodium citrate dihydrate PFR28_02611 Aspartate/glutamate leucyltransferase variable  
Trisodium citrate dihydrate PFR28_02973 HTH-type transcriptional regulator NorG variable Yes
Trisodium citrate dihydrate PFR28_03007 Aminodeoxychorismate lyase variable  
Trisodium citrate dihydrate PFR28_03188 hypothetical protein variable  
Trisodium citrate dihydrate PFR28_03394 hypothetical protein variable  
Trisodium citrate dihydrate PFR28_03405 Cell division coordinator CpoB -2.3  
Trisodium citrate dihydrate PFR28_03621 Threonine efflux protein variable  
Trisodium citrate dihydrate PFR28_03753 Glycine oxidase variable  
Trisodium citrate dihydrate PFR28_03812 HTH-type transcriptional repressor NicS variable Yes
Trisodium citrate dihydrate PFR28_03956 putative ABC transporter ATP-binding protein -1.6 Yes
Trisodium citrate dihydrate PFR28_03957 hypothetical protein -1.6 Yes
Trisodium citrate dihydrate PFR28_04056 Membrane-bound lytic murein transglycosylase F -1.3  
Trisodium citrate dihydrate PFR28_04108 Protein RarD variable Yes
Trisodium citrate dihydrate PFR28_04493 hypothetical protein variable Yes
Trisodium citrate dihydrate PFR28_04624 DNA polymerase I -1.4  
Trisodium citrate dihydrate PFR28_04648 Citrate transporter -1.5 Yes
Trisodium citrate dihydrate PFR28_04714 HTH-type transcriptional regulator TrpI variable