Specific Phenotypes for Paraburkholderia sabiae LMG 24235 in in planta experiments

Condition Gene Description Fitness Cons.
QEN71_RS00050 aldehyde dehydrogenase family protein variable  
QEN71_RS00280 AmpG family muropeptide MFS transporter -2.9  
QEN71_RS01535 cytochrome C oxidase subunit I -1.0  
QEN71_RS01915 aquaporin +2.2  
QEN71_RS02325 sensor histidine kinase -1.6  
QEN71_RS02330 response regulator transcription factor -2.0  
QEN71_RS03000 ATP-dependent Clp protease adapter ClpS -2.2  
QEN71_RS03340 sugar ABC transporter permease -1.4  
QEN71_RS04145 histone deacetylase family protein variable  
QEN71_RS04315 hypothetical protein variable  
QEN71_RS04320 sigma-54 dependent transcriptional regulator variable  
QEN71_RS04640 sigma-54 dependent transcriptional regulator variable  
QEN71_RS04960 transporter substrate-binding domain-containing protein variable  
QEN71_RS05055 3D-(3,5/4)-trihydroxycyclohexane-1,2-dione acylhydrolase (decyclizing) -2.1  
QEN71_RS05060 5-dehydro-2-deoxygluconokinase -2.1  
QEN71_RS05075 sugar ABC transporter substrate-binding protein -1.9  
QEN71_RS05085 inositol 2-dehydrogenase -2.2  
QEN71_RS05130 methyl-accepting chemotaxis protein variable  
QEN71_RS06270 isocitrate lyase -2.0  
QEN71_RS07145 class I SAM-dependent methyltransferase +1.9  
QEN71_RS07200 TetR/AcrR family transcriptional regulator variable  
QEN71_RS07345 sugar ABC transporter ATP-binding protein +2.8  
QEN71_RS07350 ABC transporter permease +3.1  
QEN71_RS07355 LacI family DNA-binding transcriptional regulator variable  
QEN71_RS07375 PrkA family serine protein kinase -1.0  
QEN71_RS07385 SpoVR family protein -1.1  
QEN71_RS08005 glucose-6-phosphate dehydrogenase variable  
QEN71_RS09830 hypothetical protein variable  
QEN71_RS10070 chemotaxis response regulator protein-glutamate methylesterase variable  
QEN71_RS10425 nitrate reductase subunit alpha +1.3  
QEN71_RS10895 cyclic di-GMP phosphodiesterase variable  
QEN71_RS12445 sigma-54-dependent Fis family transcriptional regulator -1.9  
QEN71_RS13245 GntR family transcriptional regulator -1.4  
QEN71_RS16260 aromatic ring-hydroxylating dioxygenase subunit alpha -1.5  
QEN71_RS22240 RNA polymerase sigma factor RpoS -1.9  
QEN71_RS22410 pyridoxal phosphate-dependent aminotransferase -1.9 Yes
QEN71_RS22755 leucyl/phenylalanyl-tRNA--protein transferase variable  
QEN71_RS22790 Crp/Fnr family transcriptional regulator +1.8  
QEN71_RS23090 tRNA pseudouridine(55) synthase TruB -1.2  
QEN71_RS23755 sodium:solute symporter family protein -1.8  
QEN71_RS23760 DUF4212 domain-containing protein -1.8  
QEN71_RS23765 acetate--CoA ligase -2.8  
QEN71_RS23770 DMT family transporter +1.0  
QEN71_RS24835 sensor domain-containing diguanylate cyclase variable  
QEN71_RS24885 porin -1.9  
QEN71_RS26885 glutamate/aspartate ABC transporter substrate-binding protein variable  
QEN71_RS27000 FadR/GntR family transcriptional regulator variable  
QEN71_RS29500 GTP-binding protein variable  
QEN71_RS30185 pyrroloquinoline quinone biosynthesis peptide chaperone PqqD variable  
QEN71_RS31640 PLP-dependent aminotransferase family protein variable  
QEN71_RS35960 hypothetical protein variable  
QEN71_RS35965 EAL domain-containing protein +3.2  
QEN71_RS40110 hypothetical protein variable