Specific Phenotypes for Bacteroides stercoris CC31F in carbon source complex media experiments

Condition	Gene	Description	Fitness	Cons.
ABB	HMPREF1181_RS10875	PhoH family protein	-1.5
Bacto Peptone	HMPREF1181_RS03350	haloacid dehalogenase-like hydrolase	+1.9
Bacto Peptone	HMPREF1181_RS05950	ATP-binding cassette domain-containing protein	+1.3
Bacto Peptone	HMPREF1181_RS05970	hypothetical protein	+1.4
Bacto Peptone	HMPREF1181_RS07960	NADP-specific glutamate dehydrogenase	-3.8	Yes
Bacto Peptone	HMPREF1181_RS09490	TonB-dependent receptor	-1.6
Bacto Peptone	HMPREF1181_RS10690	alanine dehydrogenase	-1.3
Bacto Peptone	HMPREF1181_RS13260	peptidase T	-1.4
Columbia	HMPREF1181_RS04570	efflux transporter outer membrane subunit	-1.1
Columbia	HMPREF1181_RS04575	multidrug efflux RND transporter permease subunit	-1.2
Columbia	HMPREF1181_RS04580	efflux RND transporter periplasmic adaptor subunit	-1.0
Columbia	HMPREF1181_RS10875	PhoH family protein	-1.4
Columbia	HMPREF1181_RS14600	BamA/TamA family outer membrane protein	-1.8
Columbia	HMPREF1181_RS16305	translocation/assembly module TamB	-1.8
GAM	HMPREF1181_RS04050	ATP-binding cassette domain-containing protein	-1.9
LB	HMPREF1181_RS04595	amidohydrolase	+1.4
LB	HMPREF1181_RS07960	NADP-specific glutamate dehydrogenase	-1.8
MRS	HMPREF1181_RS09010	NADH-quinone oxidoreductase subunit D	-1.1	Yes
MRS	HMPREF1181_RS09025	NADH-quinone oxidoreductase subunit J	-1.0	Yes
MRS	HMPREF1181_RS09035	NADH-quinone oxidoreductase subunit L	-1.0	Yes
MRS	HMPREF1181_RS09040	NADH-quinone oxidoreductase subunit M	-1.1	Yes
MRS	HMPREF1181_RS09045	NADH-quinone oxidoreductase subunit N	-1.1	Yes
MRS	HMPREF1181_RS15475	AhpC/TSA family protein	-1.5
MRS	HMPREF1181_RS16000	threonine/serine exporter family protein	-1.4
R2A	HMPREF1181_RS02875	peptidoglycan DD-metalloendopeptidase family protein	+1.2
R2A	HMPREF1181_RS09415	tetratricopeptide repeat protein	+1.2
Yeast Extract	HMPREF1181_RS03350	haloacid dehalogenase-like hydrolase	+1.9
Yeast Extract	HMPREF1181_RS05705	DUF4960 domain-containing protein	+1.1
Yeast Extract	HMPREF1181_RS08090	CusA/CzcA family heavy metal efflux RND transporter	-1.9
Yeast Extract	HMPREF1181_RS10925	hypothetical protein	+1.5
marine_broth_2216	HMPREF1181_RS00660	hypothetical protein	-1.3
marine_broth_2216	HMPREF1181_RS02140	TIGR00341 family protein	+1.4
marine_broth_2216	HMPREF1181_RS02885	long-chain fatty acid--CoA ligase	-1.5
marine_broth_2216	HMPREF1181_RS06360	HD domain-containing protein	-1.8
marine_broth_2216	HMPREF1181_RS10690	alanine dehydrogenase	-1.4
marine_broth_2216	HMPREF1181_RS11260	L-asparaginase 2	-1.6
marine_broth_2216	HMPREF1181_RS11265	OprO/OprP family phosphate-selective porin	-1.6
marine_broth_2216	HMPREF1181_RS12815	glycine betaine/L-proline ABC transporter ATP-binding protein	-2.5	Yes
marine_broth_2216	HMPREF1181_RS12820	proline/glycine betaine ABC transporter permease	-2.1	Yes
marine_broth_2216	HMPREF1181_RS12825	glycine betaine ABC transporter substrate-binding protein	-2.4	Yes
marine_broth_2216	HMPREF1181_RS13260	peptidase T	-1.2