Specific Phenotypes for Mucilaginibacter yixingensis YX-36 DSM 26809 in carbon source experiments

Condition Gene Description Fitness Cons.
D-Cellobiose ABZR88_RS00280 Gfo/Idh/MocA family oxidoreductase -2.7  
D-Cellobiose ABZR88_RS01490 SPW repeat protein +1.1  
D-Cellobiose ABZR88_RS11525 hypothetical protein +1.1  
D-Cellobiose ABZR88_RS13180 DUF1080 domain-containing protein -1.7  
D-Cellobiose ABZR88_RS13230 hypothetical protein -1.1  
D-Cellobiose ABZR88_RS14125 Glu/Leu/Phe/Val dehydrogenase -1.4  
D-Cellobiose ABZR88_RS20945 DUF4199 domain-containing protein +2.7  
D-Fructose ABZR88_RS03755 carbohydrate kinase -4.2 Yes
D-Fructose ABZR88_RS11160 sulfatase +1.7  
D-Fructose ABZR88_RS15275 L-fucose:H+ symporter permease -1.6 Yes
D-Xylose ABZR88_RS16150 xylose isomerase -5.4 Yes
L-Arabinose ABZR88_RS09650 cation-translocating P-type ATPase -1.2  
L-Arabinose ABZR88_RS12505 alpha-amylase family glycosyl hydrolase -1.4  
L-Arabinose ABZR88_RS13995 hypothetical protein +1.4  
L-Arabinose ABZR88_RS21080 transcription-repair coupling factor -1.5  
L-Rhamnose monohydrate ABZR88_RS03470 bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR -1.9  
L-Rhamnose monohydrate ABZR88_RS04640 aldose 1-epimerase family protein +4.2  
L-Rhamnose monohydrate ABZR88_RS12555 response regulator transcription factor -1.2  
L-Rhamnose monohydrate ABZR88_RS15180 (Fe-S)-binding protein -1.9 Yes
L-Rhamnose monohydrate ABZR88_RS15185 lactate utilization protein B -2.0 Yes
Sodium alginate ABZR88_RS13305 glycoside hydrolase family 31 protein -1.5  
Sodium alginate ABZR88_RS13315 RagB/SusD family nutrient uptake outer membrane protein -1.6  
Sodium alginate ABZR88_RS13320 TonB-dependent receptor -1.5  
Sodium alginate ABZR88_RS13325 DUF6377 domain-containing protein -1.7  
polygalacturonic acid ABZR88_RS00390 amidohydrolase +1.8  
polygalacturonic acid ABZR88_RS00395 serine hydrolase -2.3  
polygalacturonic acid ABZR88_RS01015 DUF3826 domain-containing protein +1.1  
polygalacturonic acid ABZR88_RS01520 efflux RND transporter periplasmic adaptor subunit +1.7  
polygalacturonic acid ABZR88_RS01645 type II toxin-antitoxin system RelE/ParE family toxin +1.3  
polygalacturonic acid ABZR88_RS01765 short chain dehydrogenase -5.1  
polygalacturonic acid ABZR88_RS01815 ABC transporter ATP-binding protein +1.3  
polygalacturonic acid ABZR88_RS02030 NADPH-dependent FMN reductase +1.4  
polygalacturonic acid ABZR88_RS02975 glucose-6-phosphate dehydrogenase -1.8  
polygalacturonic acid ABZR88_RS03365 ABC transporter ATP-binding protein -2.5  
polygalacturonic acid ABZR88_RS03370 ABC transporter permease -2.3  
polygalacturonic acid ABZR88_RS03535 threonine synthase +1.7  
polygalacturonic acid ABZR88_RS03945 ABC transporter permease +2.0  
polygalacturonic acid ABZR88_RS04590 YdeI/OmpD-associated family protein +1.4  
polygalacturonic acid ABZR88_RS04705 hypothetical protein +1.2  
polygalacturonic acid ABZR88_RS04710 aldo/keto reductase -1.4  
polygalacturonic acid ABZR88_RS04980 amino acid permease +2.3  
polygalacturonic acid ABZR88_RS05070 type II toxin-antitoxin system RelE/ParE family toxin +1.4  
polygalacturonic acid ABZR88_RS05515 START domain-containing protein +1.3  
polygalacturonic acid ABZR88_RS06240 TonB-dependent receptor -2.0  
polygalacturonic acid ABZR88_RS06245 RagB/SusD family nutrient uptake outer membrane protein -2.3  
polygalacturonic acid ABZR88_RS06590 BlaI/MecI/CopY family transcriptional regulator +1.7  
polygalacturonic acid ABZR88_RS06695 hypothetical protein -2.4  
polygalacturonic acid ABZR88_RS06700 OmpP1/FadL family transporter -2.3  
polygalacturonic acid ABZR88_RS06775 hypothetical protein -1.7  
polygalacturonic acid ABZR88_RS07555 GAF domain-containing protein +1.1  
polygalacturonic acid ABZR88_RS07570 Pycsar system effector family protein +1.8  
polygalacturonic acid ABZR88_RS08215 PAS domain-containing protein +1.9  
polygalacturonic acid ABZR88_RS08380 RagB/SusD family nutrient uptake outer membrane protein -2.6  
polygalacturonic acid ABZR88_RS08395 hypothetical protein -1.7  
polygalacturonic acid ABZR88_RS08400 hypothetical protein -2.0  
polygalacturonic acid ABZR88_RS08490 RagB/SusD family nutrient uptake outer membrane protein -3.3 Yes
polygalacturonic acid ABZR88_RS08495 TonB-dependent receptor -2.7 Yes
polygalacturonic acid ABZR88_RS08500 hybrid sensor histidine kinase/response regulator transcription factor -2.6  
polygalacturonic acid ABZR88_RS09455 PhoH family protein -1.5  
polygalacturonic acid ABZR88_RS09545 PLP-dependent aspartate aminotransferase family protein -1.4  
polygalacturonic acid ABZR88_RS10340 pitrilysin family protein -1.4  
polygalacturonic acid ABZR88_RS10380 DUF4251 domain-containing protein -2.5  
polygalacturonic acid ABZR88_RS10385 ATP-binding cassette domain-containing protein -1.8  
polygalacturonic acid ABZR88_RS10445 response regulator +1.2  
polygalacturonic acid ABZR88_RS10490 UxaA family hydrolase -4.8  
polygalacturonic acid ABZR88_RS10495 tagaturonate reductase -4.4  
polygalacturonic acid ABZR88_RS10530 LacI family DNA-binding transcriptional regulator -1.5  
polygalacturonic acid ABZR88_RS10565 thioredoxin family protein -1.6  
polygalacturonic acid ABZR88_RS11570 nicotinate phosphoribosyltransferase +1.2  
polygalacturonic acid ABZR88_RS11675 alpha/beta fold hydrolase +1.5  
polygalacturonic acid ABZR88_RS11740 YggS family pyridoxal phosphate-dependent enzyme -1.5  
polygalacturonic acid ABZR88_RS11850 putative sensor domain DACNV-containing protein +2.6  
polygalacturonic acid ABZR88_RS11995 ABC transporter ATP-binding protein -2.4  
polygalacturonic acid ABZR88_RS12010 MBL fold metallo-hydrolase +1.7  
polygalacturonic acid ABZR88_RS12535 TetR/AcrR family transcriptional regulator +1.5  
polygalacturonic acid ABZR88_RS12925 FecR family protein +1.4  
polygalacturonic acid ABZR88_RS13435 acetyl-CoA C-acyltransferase +1.8  
polygalacturonic acid ABZR88_RS13440 3-hydroxyacyl-CoA dehydrogenase/enoyl-CoA hydratase family protein +1.1  
polygalacturonic acid ABZR88_RS13810 SDR family NAD(P)-dependent oxidoreductase -4.2  
polygalacturonic acid ABZR88_RS14685 long-chain fatty acid--CoA ligase +3.2  
polygalacturonic acid ABZR88_RS15185 lactate utilization protein B -1.5  
polygalacturonic acid ABZR88_RS15335 peroxiredoxin -2.6  
polygalacturonic acid ABZR88_RS15525 DUF2147 domain-containing protein +1.8  
polygalacturonic acid ABZR88_RS15710 YqjF family protein +1.2  
polygalacturonic acid ABZR88_RS16200 MFS transporter -4.1 Yes
polygalacturonic acid ABZR88_RS16255 AI-2E family transporter +1.7  
polygalacturonic acid ABZR88_RS16320 hypothetical protein -1.8  
polygalacturonic acid ABZR88_RS16460 catalase/peroxidase HPI -2.9  
polygalacturonic acid ABZR88_RS16685 HAMP domain-containing sensor histidine kinase -1.6  
polygalacturonic acid ABZR88_RS16695 glycoside hydrolase family 130 protein +2.7  
polygalacturonic acid ABZR88_RS16900 hypothetical protein -2.0  
polygalacturonic acid ABZR88_RS16935 nitrate reductase -2.5  
polygalacturonic acid ABZR88_RS17050 DNA mismatch repair protein MutS +1.9  
polygalacturonic acid ABZR88_RS17410 OmpH family outer membrane protein +1.7  
polygalacturonic acid ABZR88_RS17865 glycoside hydrolase family 28 protein -2.2  
polygalacturonic acid ABZR88_RS18225 M42 family metallopeptidase -6.2  
polygalacturonic acid ABZR88_RS19120 S41 family peptidase +2.0  
polygalacturonic acid ABZR88_RS19730 S8 family serine peptidase -2.0  
polygalacturonic acid ABZR88_RS19840 PspC domain-containing protein +2.5  
polygalacturonic acid ABZR88_RS19850 outer membrane beta-barrel family protein +2.0  
polygalacturonic acid ABZR88_RS20875 type II toxin-antitoxin system RelE/ParE family toxin +1.8  
polygalacturonic acid ABZR88_RS20995 PIG-L family deacetylase -2.2  
polygalacturonic acid ABZR88_RS21485 response regulator transcription factor +1.6  
polygalacturonic acid ABZR88_RS21600 molybdopterin molybdotransferase MoeA -1.8  
polygalacturonic acid ABZR88_RS22115 NADPH dehydrogenase NamA -3.3