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Specific Phenotypes for
Escherichia coli ECRC101
in carbon source experiments
Condition
Gene
Description
Fitness
Cons.
Casamino-acids
MCAODC
_00915
3-methyl-2-oxobutanoate hydroxymethyltransferase
-1.8
Casamino-acids
MCAODC
_00920
pantoate--beta-alanine ligase
-2.4
Casamino-acids
MCAODC
_01045
carboxylating nicotinate-nucleotide diphosphorylase
-3.2
Yes
Casamino-acids
MCAODC
_02940
aspartate ammonia-lyase
-2.3
Yes
Casamino-acids
MCAODC
_03875
phosphomethylpyrimidine synthase ThiC
-1.3
Yes
Casamino-acids
MCAODC
_03880
thiamine phosphate synthase
-1.2
Yes
Casamino-acids
MCAODC
_03885
thiazole biosynthesis adenylyltransferase ThiF
-1.3
Casamino-acids
MCAODC
_08315
malate dehydrogenase
-3.6
Casamino-acids
MCAODC
_11900
L-aspartate oxidase
-2.3
Yes
Casamino-acids
MCAODC
_17765
class I fumarate hydratase
-2.0
Casamino-acids
MCAODC
_18910
transcription antiterminator/RNA stability regulator CspE
+1.4
Casamino-acids
MCAODC
_25615
biotin synthase BioB
-1.5
Casamino-acids
MCAODC
_27605
heme o synthase
-1.4
D-Glucose
MCAODC
_00915
3-methyl-2-oxobutanoate hydroxymethyltransferase
-1.7
Yes
D-Glucose
MCAODC
_00920
pantoate--beta-alanine ligase
-1.9
Yes
D-Glucose
MCAODC
_01045
carboxylating nicotinate-nucleotide diphosphorylase
-1.4
D-Glucose
MCAODC
_04095
phosphoenolpyruvate carboxylase
-4.1
Yes
D-Glucose
MCAODC
_04830
5-methyltetrahydropteroyltriglutamate--homocystei ne S-methyltransferase
-3.9
D-Glucose
MCAODC
_04835
HTH-type transcriptional regulator MetR
-3.7
Yes
D-Glucose
MCAODC
_07265
aspartate 1-decarboxylase autocleavage activator PanM
-2.1
Yes
D-Glucose
MCAODC
_10965
sulfate adenylyltransferase subunit CysD
-2.7
Yes
D-Glucose
MCAODC
_10970
sulfate adenylyltransferase subunit CysN
-2.6
Yes
D-Glucose
MCAODC
_11900
L-aspartate oxidase
-1.2
D-Glucose
MCAODC
_12685
sulfate/thiosulfate ABC transporter permease CysT
-1.8
D-Glucose
MCAODC
_19180
carboxy-S-adenosyl-L-methionine synthase CmoA
-1.6
L-Arabinose
MCAODC
_00840
bifunctional glycosyl transferase/transpeptidase
-1.5
Yes
L-Arabinose
MCAODC
_01290
arabinose operon transcriptional regulator AraC
-2.9
Yes
L-Arabinose
MCAODC
_01295
ribulokinase
-2.7
Yes
L-Arabinose
MCAODC
_01300
L-arabinose isomerase
-2.8
Yes
L-Arabinose
MCAODC
_01305
L-ribulose-5-phosphate 4-epimerase
-4.9
Yes
L-Arabinose
MCAODC
_03880
thiamine phosphate synthase
-1.1
Yes
L-Arabinose
MCAODC
_04095
phosphoenolpyruvate carboxylase
-3.0
Yes
L-Arabinose
MCAODC
_04830
5-methyltetrahydropteroyltriglutamate--homocystei ne S-methyltransferase
-3.7
L-Arabinose
MCAODC
_04835
HTH-type transcriptional regulator MetR
-4.7
L-Arabinose
MCAODC
_05660
Acetolactate synthase
-1.5
L-Arabinose
MCAODC
_10455
arabinose-proton symporter AraE
-1.8
Yes
L-Arabinose
MCAODC
_10965
sulfate adenylyltransferase subunit CysD
-3.1
L-Arabinose
MCAODC
_10970
sulfate adenylyltransferase subunit CysN
-2.4
L-Arabinose
MCAODC
_11900
L-aspartate oxidase
-1.2
Yes
Sodium-DL-Lactate
MCAODC
_00915
3-methyl-2-oxobutanoate hydroxymethyltransferase
-1.8
Sodium-DL-Lactate
MCAODC
_00920
pantoate--beta-alanine ligase
-1.6
Sodium-DL-Lactate
MCAODC
_04095
phosphoenolpyruvate carboxylase
-5.6
Yes
Sodium-DL-Lactate
MCAODC
_04830
5-methyltetrahydropteroyltriglutamate--homocystei ne S-methyltransferase
-4.1
Sodium-DL-Lactate
MCAODC
_04835
HTH-type transcriptional regulator MetR
-4.1
Sodium-DL-Lactate
MCAODC
_05230
ribose operon transcriptional repressor RbsR
+1.3
Sodium-DL-Lactate
MCAODC
_06285
transcriptional regulator LldR
-3.8
Yes
Sodium-DL-Lactate
MCAODC
_06290
L-lactate permease
-3.8
Yes
Sodium-DL-Lactate
MCAODC
_06880
outer membrane lipoprotein Slp
+1.0
Sodium-DL-Lactate
MCAODC
_07265
aspartate 1-decarboxylase autocleavage activator PanM
-1.7
Sodium-DL-Lactate
MCAODC
_08315
malate dehydrogenase
-3.5
Sodium-DL-Lactate
MCAODC
_10965
sulfate adenylyltransferase subunit CysD
-2.6
Yes
Sodium-DL-Lactate
MCAODC
_10970
sulfate adenylyltransferase subunit CysN
-2.7
Yes
Sodium-DL-Lactate
MCAODC
_11745
3-deoxy-7-phosphoheptulonate synthase AroF
-1.8
Yes
Sodium-DL-Lactate
MCAODC
_18265
phosphoenolpyruvate synthase
-5.5
Yes
Sodium-DL-Lactate
MCAODC
_18925
DNA-binding transcriptional regulator KdgR
-3.3
Sodium-DL-Lactate
MCAODC
_27815
Protein AroM
-1.5