Specific Phenotypes for Escherichia coli ECOR27 in carbon source experiments

Condition Gene Description Fitness Cons.
Casamino-acids NOLOHH_01345 2-dehydropantoate 2-reductase -1.0 Yes
Casamino-acids NOLOHH_02875 carboxylating nicotinate-nucleotide diphosphorylase -2.9 Yes
Casamino-acids NOLOHH_04695 aspartate ammonia-lyase -2.1 Yes
Casamino-acids NOLOHH_13045 L-aspartate oxidase -1.5 Yes
D-Glucose NOLOHH_12125 GTP diphosphokinase -1.6  
L-Arabinose NOLOHH_00660 protein ren -3.3  
L-Arabinose NOLOHH_03120 arabinose operon transcriptional regulator AraC -2.6 Yes
L-Arabinose NOLOHH_03130 ribulokinase -3.6 Yes
L-Arabinose NOLOHH_03135 L-ribulose-5-phosphate 4-epimerase -5.1 Yes
L-Arabinose NOLOHH_13830 thiosulfate/sulfate ABC transporter substrate-binding protein CysP -1.3  
L-Rhamnose NOLOHH_00315 Cnjugal protein Pilx7 +1.5  
L-Rhamnose NOLOHH_04420 HTH-type transcriptional regulator UlaR +1.4  
L-Rhamnose NOLOHH_06005 superoxide dismutase [Mn] +1.1 Yes
L-Rhamnose NOLOHH_06010 L-rhamnose/proton symporter RhaT -1.4 Yes
L-Rhamnose NOLOHH_06015 HTH-type transcriptional activator RhaR -4.9 Yes
L-Rhamnose NOLOHH_06020 HTH-type transcriptional activator RhaS -3.8 Yes
L-Rhamnose NOLOHH_06025 rhamnulokinase -3.9 Yes
L-Rhamnose NOLOHH_06030 L-rhamnose isomerase -4.7 Yes
L-Rhamnose NOLOHH_06035 rhamnulose-1-phosphate aldolase -4.9 Yes
L-Rhamnose NOLOHH_06040 L-rhamnose mutarotase -2.6 Yes
L-Rhamnose NOLOHH_07650 quinone-dependent L-lactate dehydrogenase -1.4  
L-Rhamnose NOLOHH_08260 acid resistance transcriptional activator GadE +1.6  
L-Rhamnose NOLOHH_08285 HTH-type transcriptional regulator DctR +1.4  
L-Rhamnose NOLOHH_08735 DeoR/GlpR family transcriptional regulator -2.1  
L-Rhamnose NOLOHH_09145 bacterioferritin -1.6  
L-Rhamnose NOLOHH_10730 Inner membrane protein YghB +1.4  
L-Rhamnose NOLOHH_11140 YqgE/AlgH family protein +1.6  
L-Rhamnose NOLOHH_11890 phosphoenolpyruvate--protein phosphotransferase +1.5  
L-Rhamnose NOLOHH_13265 stationary phase inducible protein CsiE +1.5  
L-Rhamnose NOLOHH_13995 Mn(2+) uptake NRAMP transporter MntH -4.5 Yes
L-Rhamnose NOLOHH_14975 bifunctional murein DD-endopeptidase/murein LD-carboxypeptidase +1.0  
L-Rhamnose NOLOHH_15625 UPF0053 protein YegH +1.7  
L-Rhamnose NOLOHH_19575 iron/manganese ABC transporter permease subunit SitC -3.9  
L-Rhamnose NOLOHH_22180 ATP-dependent Clp protease ATP-binding subunit ClpA -4.5  
L-Rhamnose NOLOHH_24000 ferrienterobactin outer membrane transporter +2.6  
Sodium-DL-Lactate NOLOHH_07655 transcriptional regulator LldR -2.1 Yes
Sodium-DL-Lactate NOLOHH_21150 ribonuclease E -1.7