Fitness data for RPSI07_RS19015 in Ralstonia solanacearum PSI07

RNA polymerase sigma factor RpoE
SEED: RNA polymerase sigma factor RpoE
KEGG: RNA polymerase sigma-70 factor, ECF subfamily

All 81 fitness values, sorted by group and condition


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group condition fitness t score  
cpg CPG -0.6 -2.0 compare
CPG -0.7 -1.6 compare
cpg no stress control CPG no stress control +0.6 +1.7 compare
CPG no stress control +0.9 +3.3 compare
in planta Plant=Tomato_C21O; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -0.1 -0.3 compare
Plant=Tomato_C21O; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted +0.2 +0.6 compare
Plant=Tomato_cv_Moneymaker; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct -0.6 -1.5 compare
Plant=Tomato_cv_Moneymaker; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct -0.7 -1.5 compare
Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted -0.4 -1.1 compare
Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted -0.5 -1.8 compare
Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted -0.3 -0.9 compare
Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted +0.0 +0.1 compare
Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted -1.1 -2.5 compare
Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted -0.3 -0.6 compare
Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -0.6 -2.5 compare
Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -0.8 -2.6 compare
Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -0.5 -1.8 compare
Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -0.4 -1.5 compare
Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -1.0 -3.2 compare
Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -1.6 -4.6 compare
m63_quarter_strength M63_quarter_strength -0.4 -1.2 compare
M63_quarter_strength +0.2 +0.4 compare
M63_quarter_strength -0.3 -0.8 compare
smsa no antibiotic control SMSA no antibiotic control +0.8 +2.6 compare
SMSA no antibiotic control +0.6 +2.9 compare
SMSA no antibiotic control +0.2 +0.5 compare
stress SMSA with Ralstonia_antibiotic_mix -0.2 -0.4 compare
SMSA with Ralstonia_antibiotic_mix +0.5 +2.9 compare
SMSA with Ralstonia_antibiotic_mix -0.6 -1.7 compare
SMSA with Ralstonia_antibiotic_mix_minus_Bacitracin +0.3 +0.7 compare
SMSA with Ralstonia_antibiotic_mix_minus_Bacitracin +0.4 +1.7 compare
SMSA with Ralstonia_antibiotic_mix_minus_Bacitracin -0.2 -0.4 compare
SMSA with Ralstonia_antibiotic_mix_minus_Chloramphenicol -0.1 -0.4 compare
SMSA with Ralstonia_antibiotic_mix_minus_Chloramphenicol +0.4 +2.3 compare
SMSA with Ralstonia_antibiotic_mix_minus_Chloramphenicol -0.1 -0.3 compare
SMSA with Ralstonia_antibiotic_mix_minus_Chloramphenicol_and_CrystalViolet -2.3 -5.2 compare
SMSA with Ralstonia_antibiotic_mix_minus_Chloramphenicol_and_CrystalViolet -2.8 -7.3 compare
SMSA with Ralstonia_antibiotic_mix_minus_Chloramphenicol_and_CrystalViolet -2.6 -5.7 compare
SMSA with Ralstonia_antibiotic_mix_minus_CrystalViolet -2.2 -4.6 compare
SMSA with Ralstonia_antibiotic_mix_minus_CrystalViolet -2.7 -6.6 compare
SMSA with Ralstonia_antibiotic_mix_minus_CrystalViolet -2.3 -4.3 compare
SMSA with Ralstonia_antibiotic_mix_minus_Penicillin -0.2 -0.5 compare
SMSA with Ralstonia_antibiotic_mix_minus_Penicillin +0.2 +1.2 compare
SMSA with Ralstonia_antibiotic_mix_minus_Penicillin -0.3 -1.1 compare
SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin +0.5 +1.4 compare
SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin +0.5 +3.0 compare
SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin +0.2 +0.5 compare
SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin_and_Chloramphenicol +0.2 +0.7 compare
SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin_and_Chloramphenicol +0.5 +2.8 compare
SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin_and_Chloramphenicol -0.2 -0.5 compare
SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin_and_Chloramphenicol_and_CrystalViolet +0.9 +3.2 compare
SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin_and_Chloramphenicol_and_CrystalViolet +1.0 +6.0 compare
SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin_and_Chloramphenicol_and_CrystalViolet +0.7 +1.8 compare
SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin_and_CrystalViolet +0.2 +0.7 compare
SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin_and_CrystalViolet +0.5 +2.7 compare
SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin_and_CrystalViolet +0.2 +0.6 compare
SMSA with Ralstonia_antibiotic_mix_minus_Triphenyltetrazoliumchloride -0.8 -2.4 compare
SMSA with Ralstonia_antibiotic_mix_minus_Triphenyltetrazoliumchloride -0.4 -2.1 compare
SMSA with Ralstonia_antibiotic_mix_minus_Triphenyltetrazoliumchloride -1.3 -4.6 compare
survival water survival rep A; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=0_days +0.3 +1.0 compare
water survival rep A; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=0_days +0.5 +1.9 compare
water survival rep B; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=0_days +0.5 +1.9 compare
water survival rep B; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=0_days +1.0 +3.9 compare
water survival rep C; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=0_days +0.4 +1.5 compare
water survival rep A; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=180_days -0.8 -2.0 compare
water survival rep B; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=180_days +0.2 +0.7 compare
water survival rep C; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=180_days -0.7 -2.1 compare
water survival rep A; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=1_days +0.4 +1.5 compare
water survival rep B; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=1_days +1.0 +3.5 compare
water survival rep C; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=1_days +0.3 +1.5 compare
water survival rep A; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=30_days +0.5 +1.5 compare
water survival rep B; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=30_days +0.7 +3.1 compare
water survival rep C; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=30_days +0.5 +1.8 compare
water survival rep B; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=7_days +0.9 +3.8 compare
water survival rep C; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=7_days +0.5 +2.0 compare
water survival rep A; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=90_days -0.0 -0.0 compare
water survival rep B; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=90_days +0.5 +2.2 compare
water survival rep C; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=90_days -0.3 -1.4 compare
xylem sap Plant=Tomato_MoneyMaker; PlantTreatment=exvivo_xylem_sap_from_healthy_plant; Sample=xylem_sap; Collection=25hr_after_growth_in_xylem_sap -0.1 -0.4 compare
Plant=Tomato_MoneyMaker; PlantTreatment=exvivo_xylem_sap_from_healthy_plant; Sample=xylem_sap; Collection=25hr_after_growth_in_xylem_sap +0.5 +1.8 compare
Plant=Tomato_MoneyMaker; PlantTreatment=exvivo_xylem_sap_from_healthy_plant; Sample=xylem_sap; Collection=25hr_after_growth_in_xylem_sap -0.4 -1.1 compare