Fitness data for QEN71_RS27840 in Paraburkholderia sabiae LMG 24235

1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxamide isomerase
SEED: Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase (EC 5.3.1.16)
KEGG: phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase

All 60 fitness values, sorted by group and condition


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group condition fitness t score  
carbon source 2-Deoxy-D-Ribose (C) -2.6 -10.9 compare
2-Deoxy-D-Ribose (C) -2.6 -11.7 compare
casaminos (C) -0.1 -0.6 compare
casaminos (C) -0.1 -0.4 compare
D,L-Malic Acid (C) -4.1 -12.5 compare
D,L-Malic Acid (C) -4.4 -11.6 compare
D-Fructose (C) -2.8 -10.8 compare
D-Fructose (C) -3.6 -14.1 compare
D-Glucose (C) -3.6 -13.8 compare
D-Glucose (C) -4.1 -13.5 compare
D-Sorbitol (C) -3.8 -13.4 compare
D-Sorbitol (C) -3.7 -12.4 compare
D-Xylose (C) -4.6 -9.9 compare
Fumaric (C) -3.5 -12.5 compare
Fumaric (C) -3.2 -12.8 compare
L-Aspartic Acid (C) -4.0 -13.6 compare
L-Aspartic Acid (C) -3.7 -14.8 compare
L-Glutamic (C) -3.2 -14.1 compare
L-Glutamic (C) -3.2 -13.9 compare
L-Histidine (C) -0.2 -1.2 compare
L-Histidine (C) -0.1 -0.9 compare
L-Leucine (C) -4.1 -13.8 compare
L-Leucine (C) -4.2 -13.9 compare
L-Rhamnose (C) -4.3 -12.5 compare
L-Rhamnose (C) -3.5 -14.1 compare
D,L-Lactate (C) -3.4 -13.9 compare
D,L-Lactate (C) -3.4 -13.0 compare
succinate (C) -4.7 -12.5 compare
succinate (C) -3.8 -14.6 compare
coculture Psabiae_ML3b with MT80 +0.1 +0.5 compare
Psabiae_ML3b with MT81 +0.1 +0.8 compare
in planta Plant=Oryza_sativa; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days -0.5 -2.9 compare
Plant=Oryza_sativa; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days -3.3 -13.7 compare
Plant=Oryza_sativa; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days -1.7 -6.8 compare
Plant=Oryza_sativa; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days -1.4 -7.1 compare
Plant=Phaseolus_vulgaris; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days -4.6 -7.8 compare
motility Motility_inner_sample +0.3 +2.1 compare
Motility_inner_sample +0.4 +2.6 compare
Motility_inner_sample +0.3 +1.7 compare
Motility_inner_sample +0.2 +1.4 compare
Motility_inner_sample_with_outgrowth +0.3 +2.0 compare
Motility_inner_sample_with_outgrowth +0.3 +2.3 compare
Motility_outer_sample +0.3 +2.1 compare
Motility_outer_sample +0.3 +1.7 compare
Motility_outer_sample_with_outgrowth +0.0 +0.3 compare
Motility_outer_sample_with_outgrowth +0.3 +1.5 compare
Motility_outer_sample_with_outgrowth +0.3 +2.0 compare
Motility_outer_sample_with_outgrowth +0.4 +2.7 compare
stress LB_noSalt with Cobalt chloride 0.25 mM +0.2 +1.5 compare
LB_noSalt with Cobalt chloride 0.25 mM +0.1 +0.9 compare
LB_noSalt with Chloride 200 mM +0.1 +0.4 compare
LB_noSalt with Chloride 200 mM +0.2 +1.4 compare
LB_noSalt with Chloride 200 mM -0.0 -0.2 compare
LB_noSalt with Chloride 200 mM -0.1 -0.4 compare
LB_noSalt with Zinc 0.5 mM -0.2 -1.4 compare
LB_noSalt with Zinc 0.5 mM -0.2 -1.6 compare
supernatant Filtered_supernatant_MT183_in_LB +0.4 +2.7 compare
Filtered_supernatant_MT71_in_LB +0.2 +1.8 compare
Filtered_supernatant_MT80_in_LB +0.2 +1.3 compare
Filtered_supernatant_MT81_in_LB -0.0 -0.1 compare