Fitness data for PP_5SB in Pseudomonas putida KT2440

5S ribosomal RNA

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 1.2)


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group condition fitness t score  
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs -2.3 -1.5 compare
pH Growth at pH7 and (C) D-Glucose -2.0 -1.0 compare
no stress control Growth with no stress -1.8 -2.1 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -1.6 -2.2 compare
nitrogen source nitrite (N) -1.6 -3.1 compare
pH Growth at pH7 and (C) Trisodium citrate -1.5 -1.3 compare
carbon source L-Glutamic (C) -1.5 -3.9 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -1.5 -2.1 compare
r2a control with 0.2x vogels R2A control with 0.2X Vogels -1.4 -1.8 compare
carbon source L-tyrosine 5 mM (C) -1.4 -2.7 compare
mixed community Putida_ML5X with Paraburkholderia sabiae T6SS mutant -1.3 -2.0 compare
stress Growth with Chloride 500 mM; with MOPS -1.3 -2.4 compare
phage P. put PUT 10 MOI 10 -1.3 -1.8 compare
temperature shift Temperature shift 30_to_34; with MOPS -1.3 -3.4 compare
temperature Growth at 34C -1.3 -3.8 compare
temperature Growth at 30C -1.3 -2.9 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=72_hrs -1.3 -1.1 compare
in planta Plant=Zea_mays; PlantTreatment=25mM_NaCl; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -1.2 -1.4 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=144_hrs -1.2 -1.7 compare
phage P. putida Missley MOI 0.1 +1.7 +4.4 compare