Fitness data for PP_5743 in Pseudomonas putida KT2440

putative TonB-dependent receptor protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.3)


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group condition fitness t score  
temperature Growth at 25C -0.7 -2.7 compare
nitrogen source D-2-Aminobutyric (N) -0.4 -1.4 compare
temperature shift Temperature shift 10_to_25; with MOPS -0.4 -1.5 compare
temperature Growth at 25C; with MOPS -0.3 -1.6 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs +0.3 +1.5 compare
carbon source D-Fructose (C) +0.3 +1.8 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.3 +1.1 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=144_hrs +0.3 +1.9 compare
stress R2A with Fusaric 480 ug/mL +0.3 +2.0 compare
temperature shift Temperature shift 30_to_25; with MOPS +0.3 +1.5 compare
mixed carbon source mixed (C)s Trisodium citrate 10 mM and L-Phenylalanine 5 mM +0.3 +2.2 compare
temperature Growth at 25C +0.4 +1.4 compare
nitrogen source 2,6-diaminopimelic (N) +0.4 +1.6 compare
temperature Growth at 30C; with MOPS +0.4 +1.5 compare
carbon source D-Glucose (C); with MOPS +0.5 +1.9 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=72_hrs +0.5 +1.7 compare
micoeukaryotes Tetrahymena sp., Mixed culture-2 +0.5 +2.2 compare
pH pH 7 +0.6 +3.3 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=144_hrs +0.6 +3.1 compare
phage P. putida Sci Big MOI 0.1 +0.6 +2.0 compare