Fitness data for PP_5719 in Pseudomonas putida KT2440

choline-responsive transcriptional repressor BetI
SEED: HTH-type transcriptional regulator BetI
KEGG: TetR/AcrR family transcriptional regulator, transcriptional repressor of bet genes

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.7)


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group condition fitness t score  
nitrogen source Propandiamine (N) -4.6 -6.3 compare
nitrogen source Propandiamine (N) -2.0 -5.2 compare
stress MOPS minimal media_Glucose20mM with Fluoroacetate 80 mM -1.2 -3.1 compare
nitrogen source D-2-Aminobutyric (N) -1.1 -2.6 compare
phage P. putida Sci small MOI 0.1 -1.0 -2.3 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=72_hrs -1.0 -2.7 compare
carbon source Lignin Monomers (C) -0.9 -3.1 compare
in planta Plant=Zea_mays; PlantTreatment=25mM_NaCl; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -0.9 -3.2 compare
stress 3-methyl-3-butenol (pure) 0.25 vol% -0.8 -4.1 compare
stress MOPS minimal media_Glucose20mM with Fluoroacetate 80 mM -0.8 -3.4 compare
nitrogen source 2,6-diaminopimelic (N) -0.8 -2.3 compare
carbon source Valerolactone (C) -0.8 -2.1 compare
carbon source Decanoic (C) -0.8 -4.4 compare
stress Growth with Chloride 500 mM; with MOPS -0.7 -3.2 compare
pH D-Glucose (C) pH 6.5 -0.7 -1.8 compare
carbon source Valerolactone (C) -0.7 -2.1 compare
nitrogen source DL-2-Aminobutyric (N) +0.7 +3.8 compare
carbon source 3-methyl-1-butanol 0.1 vol% (C) +1.0 +4.5 compare
nitrogen source Carnitine Hydrochloride (N) +1.0 +6.4 compare
nitrogen source Carnitine Hydrochloride (N) +1.3 +8.3 compare