Fitness data for PP_5715 in Pseudomonas putida KT2440

protein of unknown function

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.5)


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group condition fitness t score  
nitrogen source 2,6-diaminopimelic (N) -1.0 -2.9 compare
temperature shift Temperature shift 10_to_25; with MOPS -0.8 -1.8 compare
phage P. putida Sci Big MOI 0.1 -0.7 -2.6 compare
phage P. putida Missley MOI 0.1 -0.7 -1.8 compare
carbon source ferulate (C); with MOPS -0.7 -1.8 compare
phage P. putida South MOI 0.1 -0.6 -3.2 compare
nitrogen source nitrogen source nitrate 5mM -0.6 -2.6 compare
carbon source ferulate (C); with MOPS -0.6 -1.6 compare
carbon source D-Glucose (C); with MOPS -0.6 -1.9 compare
reactor 24hr timepoint from 1L M9/1% dextrose BATCH fermentation in 2L Sartorius Biostat reactor kept at 30% DO. -0.5 -2.4 compare
temperature shift Temperature shift 30_to_34; with MOPS +0.5 +2.1 compare
pH pH 5 +0.5 +2.0 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=288_hrs +0.6 +2.3 compare
temperature Growth at 25C +0.6 +2.8 compare
in planta Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.6 +1.9 compare
stress Growth with Chloride 500 mM; with MOPS +0.6 +2.7 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.6 +1.7 compare
carbon source carbon source 4-vinylphenol 0.01 mM +0.6 +2.2 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=288_hrs +0.7 +3.0 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +1.0 +2.2 compare