Fitness data for PP_5712 in Pseudomonas putida KT2440

conserved protein of unknown function
SEED: Ais protein, putative

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.9)


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group condition fitness t score  
phage P. putida Sci small MOI 0.1 -2.3 -3.1 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=no_outgrowth_LB; Time=7_days -1.8 -2.9 compare
carbon source Glutaric (C) -1.4 -2.4 compare
nitrogen source nitrogen source nitrite 0.5mM -1.2 -1.3 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -1.0 -2.2 compare
carbon source 2-Keto-D-gluconic hemicalcium salt (C) -1.0 -1.9 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant -0.9 -2.4 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=72_hrs -0.9 -1.1 compare
pH pH 7 +0.9 +2.1 compare
carbon source Valeric (C) +1.0 +3.5 compare
carbon source D-Glucose (C) +1.0 +2.1 compare
stress R2A with Polymyxin B sulfate 0.001 mg/ml +1.0 +3.6 compare
supernatant Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X +1.0 +4.5 compare
nitrogen source Urea (N); with MOPS +1.0 +2.4 compare
supernatant Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X +1.1 +2.6 compare
carbon source carbon source 2-Deoxy-D-glucose 50 mM +1.1 +2.0 compare
carbon source carbon source 3-O-methyl-glucose 50 mM +1.2 +2.1 compare
pH pH 6 +1.2 +2.4 compare
pH pH 8 +1.3 +2.5 compare
supernatant Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X +1.4 +2.6 compare