Fitness data for PP_5698 in Pseudomonas putida KT2440

conserved exported protein of unknown function
SEED: 3-phosphoglycerate kinase

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.7)


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group condition fitness t score  
carbon source ferulate (C); with MOPS -1.3 -2.5 compare
micoeukaryotes Dictyostellum sp.mixed culture-2 -1.1 -3.4 compare
carbon source ferulate (C); with MOPS -1.1 -2.2 compare
temperature Growth at 25C -0.9 -1.5 compare
phage P. putida South MOI 0.1 -0.9 -2.7 compare
nitrogen source nitrogen source nitrite 1mM -0.8 -2.0 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=288_hrs -0.8 -1.5 compare
temperature shift Temperature shift 10_to_30; with MOPS -0.8 -1.9 compare
pH Growth at pH6 and (C) D-Glucose -0.7 -1.3 compare
carbon source Vanillin (C) -0.7 -2.0 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=144_hrs -0.7 -1.8 compare
micoeukaryotes Tetrahymena sp., Mixed culture-1 +0.7 +2.9 compare
carbon source carbon source 4-vinylphenol 0.01 mM +0.7 +2.0 compare
supernatant Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.2X +0.7 +2.9 compare
stress R2A with Polymyxin B sulfate 0.001 mg/ml +0.7 +1.6 compare
carbon source Lignin Monomers (C) +0.7 +1.8 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=20h_outgrowth_LB; Time=7_days +0.7 +1.3 compare
supernatant Supernatant; Trichoderma atroviride IMI tmk3mutant grown in Vogels_fungal_media, filtered; 0.2X +0.8 +3.3 compare
in planta Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.9 +1.9 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.9 +2.0 compare