Fitness data for PP_5673 in Pseudomonas putida KT2440

putative D-alanine--D-alanine ligase
SEED: D-alanine--D-alanine ligase (EC 6.3.2.4)
KEGG: D-alanine-D-alanine ligase

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.5)


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group condition fitness t score  
carbon source acetate (C) -0.8 -1.6 compare
stress Growth with Chloride 200 mM; with MOPS -0.8 -2.0 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant -0.7 -2.2 compare
nitrogen source NAG (N); with MOPS -0.7 -1.2 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant -0.6 -3.1 compare
carbon source Glutaric (C) -0.6 -2.9 compare
carbon source ferulate (C); with MOPS -0.6 -1.4 compare
in planta Plant=Zea_mays; PlantTreatment=25mM_NaCl; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -0.6 -1.5 compare
micoeukaryotes Tetrahymena sp., Mixed culture-2 -0.6 -1.5 compare
nitrogen source nitrogen source nitrite 1mM -0.6 -1.9 compare
temperature Growth at 30C; with MOPS -0.5 -1.5 compare
carbon source D-Glucose (C) 2.5 mM -0.5 -2.3 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=144_hrs +0.5 +1.8 compare
r2a control with 0.2x vogels R2A control with 0.2X Vogels +0.5 +3.3 compare
stress Growth with Chloride 500 mM +0.6 +2.2 compare
phage P. putida Missley MOI 0.1 +0.6 +2.0 compare
stress R2A with Polymyxin B sulfate 0.001 mg/ml +0.6 +1.7 compare
stress Growth with Chloride 500 mM; with MOPS +0.6 +3.0 compare
pH Growth at pH7 and (C) D-Glucose +0.6 +2.1 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=288_hrs +0.8 +2.0 compare