Fitness data for PP_5643 in Pseudomonas putida KT2440

conserved protein of unknown function

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.4)


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group condition fitness t score  
temperature shift Temperature shift 10_to_25; with MOPS -0.6 -2.4 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=144_hrs -0.5 -2.1 compare
carbon source L-Leucine (C) -0.4 -1.8 compare
carbon source D-Glucose (C) -0.4 -2.0 compare
nitrogen source nitrate (N) -0.4 -1.6 compare
temperature shift Temperature shift 10_to_30 -0.4 -1.9 compare
supernatant LB 0.1x with 55.5 mM D-Glucose with Supernatant: Acinetobacter +0.4 +2.6 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs +0.4 +1.4 compare
pH pH 7 +0.4 +2.0 compare
in planta Plant=Zea_mays; PlantTreatment=25mM_NaCl; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.4 +2.3 compare
phage PUT8 MOI 0.1 +0.4 +2.3 compare
carbon source 1,3-Butandiol (C) +0.4 +2.1 compare
nitrogen source NAG (N); with MOPS +0.4 +1.9 compare
nitrogen source nitrogen source nitrite 1mM +0.5 +2.4 compare
pH pH 9 +0.5 +2.2 compare
nitrogen source nitrogen source nitrate 5mM +0.5 +3.1 compare
carbon source carbon source D-Xylose 66.6 mM and Glycerol 108.6 mM +0.6 +2.5 compare
phage PUT8 MOI 0.1 +0.6 +2.9 compare
phage PUT 8 MOI 1 +0.7 +3.1 compare
phage PUT8 MOI 10 +0.7 +3.3 compare