Fitness data for PP_5640 in Pseudomonas putida KT2440

conserved protein of unknown function

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 1.2)


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group condition fitness t score  
phage PUT 8 MOI 1 -1.9 -1.2 compare
carbon source Tween 20 (C) -1.9 -1.9 compare
temperature Growth at 30C; with MOPS -1.9 -2.1 compare
nitrogen source nitrate (N) -1.7 -1.9 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs -1.6 -1.3 compare
nitrogen source Urea (N) -1.6 -2.0 compare
temperature shift Temperature shift 30_to_34; with MOPS -1.5 -1.8 compare
pH pH 7 -1.5 -1.8 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -1.5 -2.2 compare
nitrogen source no extra (N); with MOPS -1.4 -2.5 compare
mixed carbon source mixed (C)s Trisodium citrate 10 mM and 4-azido-L-phenylalanine 10 mM -1.3 -2.3 compare
in planta Plant=Zea_mays; PlantTreatment=25mM_NaCl; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -1.3 -1.9 compare
carbon source Oleic (C) -1.2 -3.9 compare
temperature shift Temperature shift 30_to_21; with MOPS -1.2 -1.4 compare
temperature shift Temperature shift 30_to_25 -1.2 -1.6 compare
pH Growth at pH7 and (C) D-Glucose -1.2 -0.7 compare
temperature shift Temperature shift 10_to_25; with MOPS -1.2 -1.9 compare
mixed community Putida_ML5X with Paraburkholderia sabiae T6SS mutant -1.2 -1.6 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=0_hrs +1.2 +3.1 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +1.4 +2.0 compare