Fitness data for PP_5635 in Pseudomonas putida KT2440

conserved protein of unknown function

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.6)


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group condition fitness t score  
pH Growth at pH7 and (C) Trisodium citrate -1.0 -2.6 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs -0.9 -2.0 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=0_hrs -0.8 -2.1 compare
stress MOPS minimal media_Glucose20mM with PHB-HV-HH 0.1 mg/mL -0.8 -2.7 compare
nitrogen source Propiolactam (N) -0.8 -2.4 compare
carbon source L-Leucine (C) -0.7 -2.9 compare
r2a control with 0.2% methanol R2A control with 0.2% methanol -0.7 -2.2 compare
stress Growth with Chloride 200 mM; with MOPS -0.6 -2.1 compare
micoeukaryotes Tetrahymena sp., Mixed culture-1 -0.6 -2.3 compare
phage P. putida PUT 7 MOI 1 +0.6 +1.9 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days +0.6 +2.3 compare
phage P. putida Sci small MOI 0.1 +0.6 +1.6 compare
carbon source carbon source 2-Deoxy-D-glucose 10 mM +0.6 +2.2 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant +0.6 +2.6 compare
carbon source carbon source 3-O-methyl-glucose 10 mM +0.6 +2.2 compare
pH Growth at pH6 and (C) D-Glucose +0.6 +1.6 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.6 +2.1 compare
phage PUT8 MOI 0.1 +0.7 +4.2 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.7 +1.8 compare
carbon source Valeric (C) +0.7 +2.9 compare