Fitness data for PP_5624 in Pseudomonas putida KT2440

conserved protein of unknown function

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.6)


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group condition fitness t score  
carbon source carbon source 2-Deoxy-D-glucose 100 mM -0.9 -2.5 compare
nitrogen source Propiolactam (N) -0.9 -1.7 compare
nitrogen source D-2-Aminobutyric (N) -0.8 -1.7 compare
nitrogen source Ammonium chloride (N) -0.8 -2.0 compare
phage P. putida South MOI 10 -0.8 -1.8 compare
carbon source 4-Aminobutyric 10 mM (C) -0.7 -2.2 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant -0.7 -1.7 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs -0.7 -2.0 compare
stress MOPS minimal media_Glucose20mM with Carbenicillin 100 .g/mL -0.7 -1.7 compare
carbon source Acetate Carbon Source (5mM) -0.7 -2.5 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=0_hrs -0.6 -1.4 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=72_hrs +0.6 +1.9 compare
phage P. putida Sci small MOI 0.1 +0.7 +1.5 compare
mixed carbon source mixed (C)s Trisodium citrate 10 mM and L-Meta-tyrosine 10 mM +0.7 +3.1 compare
stress Growth with Chloride 500 mM; with MOPS +0.7 +2.7 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.7 +1.0 compare
carbon source ferulate (C); with MOPS +0.8 +2.7 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.8 +1.4 compare
carbon source Crotonic (C) +0.9 +1.5 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=288_hrs +1.0 +3.3 compare