Fitness data for PP_5618 in Pseudomonas putida KT2440

putative Cro/CI transcriptional regulator

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.4)


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group condition fitness t score  
carbon source ferulate (C); with MOPS -0.7 -2.9 compare
pH Valerolactone (C) pH 6.5 -0.5 -2.0 compare
phage PUT8 MOI 0.1 -0.5 -2.3 compare
stress R2A with Polymyxin B sulfate 0.001 mg/ml -0.5 -2.4 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=72_hrs -0.4 -1.5 compare
carbon source L-Leucine (C) -0.4 -1.7 compare
stress 3-methyl-3-butenol (commercial) 0.25 vol% -0.4 -2.6 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.4 +1.7 compare
phage P. putida South MOI 10 +0.4 +1.6 compare
stress Growth with Chloride 500 mM; with MOPS +0.4 +2.0 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=0_hrs +0.4 +2.1 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=72_hrs +0.4 +2.1 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=72_hrs +0.5 +2.8 compare
carbon source ferulate (C); with MOPS +0.5 +1.3 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=0_hrs +0.5 +1.6 compare
nitrogen source NAG (N); with MOPS +0.6 +1.5 compare
phage P. putida Sci Big MOI 0.1 +0.6 +3.5 compare
phage P. putida PUT 7 MOI 1 +0.7 +3.4 compare
pH Growth at pH7 and (C) Trisodium citrate +0.7 +2.8 compare
phage P. putida Missley MOI 0.1 +1.2 +5.0 compare