Fitness data for PP_5569 in Pseudomonas putida KT2440

protein of unknown function of phage origin

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 1.1)


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group condition fitness t score  
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=72_hrs -3.7 -3.1 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=72_hrs -2.4 -2.5 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs -2.3 -2.3 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -1.9 -3.0 compare
carbon source D-Glucose (C) -1.5 -2.3 compare
pH Growth at pH6 and (C) Trisodium citrate -1.5 -2.5 compare
pH Growth at pH7 and (C) D-Glucose -1.1 -1.0 compare
carbon source D-Glucose (C) -1.1 -1.0 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs -1.1 -1.0 compare
in planta Plant=Zea_mays; PlantTreatment=Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days -1.1 -2.7 compare
reactor 48hr timepoint from 1L M9/1% dextrose BATCH fermentation in 2L Sartorius Biostat reactor kept at 10% DO. +1.1 +2.6 compare
temperature shift Temperature shift 30_to_25; with MOPS +1.1 +2.2 compare
phage PUT8 MOI 0.1 +1.2 +2.5 compare
carbon source Tween 20 (C) +1.2 +3.8 compare
temperature shift Temperature shift 30_to_25 +1.3 +3.5 compare
phage PUT8 MOI 10 +1.4 +4.7 compare
phage P. putida Sci small MOI 0.1 +1.4 +2.0 compare
phage PUT 8 MOI 1 +1.4 +2.7 compare
in planta Plant=Zea_mays-bx1; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +1.6 +1.7 compare
phage PUT8 MOI 10 +1.7 +5.8 compare